Wolbachia endosymbiont of Cimex lectularius: WCLE_005930
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Entry
WCLE_005930 CDS
T03628
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wcl
Wolbachia endosymbiont of Cimex lectularius
Pathway
wcl03410
Base excision repair
wcl03430
Mismatch repair
wcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
WCLE_005930 (recJ)
03430 Mismatch repair
WCLE_005930 (recJ)
03440 Homologous recombination
WCLE_005930 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcl03400
]
WCLE_005930 (recJ)
DNA repair and recombination proteins [BR:
wcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
WCLE_005930 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
WCLE_005930 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
WCLE_005930 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAO99899
UniProt:
A0A060Q432
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All DBs
Position
complement(586284..588023)
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AA seq
579 aa
AA seq
DB search
MLLDIEKRSITNALWRLQEADQREILTLTQKFELPEILARALVTRGVNVESAGNFLYPLI
RSLLPDPFHLLDMDKAVCRIIRAINNGENIAIFGDYDVDGATSSALINRYLRTIGIRSII
YIPDRINEGYGLNADALLQLKKKGIDLCISVDCGTLAYQPIEDAKNFGLDIIVIDHHLGT
EKLPSAVAVVNPNRLDESSPYTNLAAVGVSFLLIVALNKNLREQGFFTNRKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVSQGLKVMSARKNVGFRVLFDALGILEKPSVSRLGFNIGP
CINAGGRIGEASLGARLLSTDNEEEAHSIALKLIDLNNARKMMENEAILEATTQVEKSMK
SGANFIMVSGNWHQGIIGIIASRLKERFHLPAVVISFNNGIGKASSRSIPGINIGAAVLS
AKFINLIIEGGGHSMAAGFAIKEDKINDLYDFFTERFAHFTHNKALKADGIVTAKAINLS
LWNQLRRLEPFGVGNPEPRFIIQGAKIRRPEVIGVDHIKCFIADDNAMVRAIAFRSANTH
LGSAIMKGNVEAILGKISMNYWNGNEFVQFLIEDVLTIS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgatattgaaaagcgcagcataacaaatgcactatggaggttacaagaagca
gaccaaagggaaattttaacccttactcaaaaatttgaattaccagaaatactagctagg
gcacttgttactcgcggtgttaatgtagaaagtgcaggcaacttcttatatccactaatc
agatcgctattaccagatcccttccatcttcttgacatggataaagctgtttgccgcata
atacgggcaataaataatggtgaaaacatagcaatattcggtgactacgacgttgatggt
gcaacgtcatcagcattaattaacagatacctaaggacgattggtatacgctctataatt
tacattccagatcgtattaatgagggctatggattaaatgcagacgctttattgcaactt
aaaaagaaaggtattgatctatgtatttccgttgattgcggcacacttgcatatcaaccg
atagaggatgccaagaacttcggtcttgatattatagttatcgatcatcaccttggcacg
gaaaaactaccaagcgctgtagcagttgttaatccaaatcgcctcgatgagagctcccct
tatactaaccttgcagcagttggagtgtcatttctgctaattgttgctcttaacaaaaac
ctgcgtgaacagggattttttaccaacagaaaggaaccagatttatttgatctgctggat
ttggttgcccttggcactgtttgcgatgttatgcagatcactggcctcaatagagcattt
gtctcacaaggattaaaagtgatgtcagcaagaaaaaacgtcggctttcgcgttttattt
gatgctttaggaattctcgaaaaaccaagcgtttcccggctgggttttaatattgggcca
tgcataaatgctggaggaagaatcggagaagcatctcttggcgcaaggctgctttctaca
gacaatgaagaggaggcacattccatcgcgctaaaattaatagacttgaataatgcaagg
aagatgatggaaaatgaggctattttagaagccacaacacaagtggaaaagtccatgaaa
tcaggtgcgaattttataatggtaagcggtaattggcatcagggaataatcggtataatt
gcatcaaggctgaaagagcggtttcacttgccggcagtagtgatatcttttaataacgga
ataggaaaagcaagcagcaggtcaattcctgggattaatatcggagctgcagttctttct
gcaaaatttataaatctgattattgaaggtggcggccatagtatggcagcagggtttgcg
attaaggaagacaaaataaacgatttatatgacttttttactgagaggtttgcgcacttt
acgcataataaggctttaaaagccgacggtatagtaactgctaaggcaataaacttatcc
ctgtggaatcaactgcgacgtttggagccatttggtgttggcaatcctgagccgaggttt
attatccaaggagcaaagattaggaggcctgaagttataggagttgaccatataaaatgc
ttcattgctgacgataatgctatggttagagccattgcgtttcgttctgcaaatactcat
cttggttctgctatcatgaagggtaatgttgaagctattttgggcaaaatctctatgaat
tattggaatggcaatgagtttgtacaatttttaatagaagatgtattgactattagctga
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