Wolbachia endosymbiont of Cimex lectularius: WCLE_008730
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Entry
WCLE_008730 CDS
T03628
Symbol
holB
Name
(GenBank) DNA polymerase III delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
wcl
Wolbachia endosymbiont of Cimex lectularius
Pathway
wcl03030
DNA replication
wcl03430
Mismatch repair
wcl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WCLE_008730 (holB)
03430 Mismatch repair
WCLE_008730 (holB)
03440 Homologous recombination
WCLE_008730 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcl03032
]
WCLE_008730 (holB)
03400 DNA repair and recombination proteins [BR:
wcl03400
]
WCLE_008730 (holB)
Enzymes [BR:
wcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WCLE_008730 (holB)
DNA replication proteins [BR:
wcl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WCLE_008730 (holB)
DNA repair and recombination proteins [BR:
wcl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WCLE_008730 (holB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_24
AAA
NB-ARC
nSTAND3
RsgA_GTPase
DUF815
Motif
Other DBs
NCBI-ProteinID:
BAP00166
LinkDB
All DBs
Position
complement(860518..861348)
Genome browser
AA seq
276 aa
AA seq
DB search
MKKVIGHDQAKKKLMDNLSVQSWLVCGKKGIGKATLVKSFSNWFLIKNYDEVALDLHIVE
GDTIGVEKVREMKNFLYLSPIQSEYKIAVIDSLEAMTNNAKNAILKILEEPPKNSKIFII
SHKPYNIQTTIKCRCFQLNLLPLTYDETKQIVSSQCKFDDQTFDEIITLFPGTPGMIINA
ISSDTYESYKCFYTFLRNLNNPEVINKVINSEIELELASYIIQAFVLDKIKGEVNGVEIL
LSKWKKIDELFVAAKQLHLDKKHVLANAINIIASVH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtaataggtcatgatcaagccaaaaaaaagttaatggacaacttgtctgtt
caatcttggctggtctgtggtaaaaaggggataggaaaagcaacactcgtaaaatccttt
tctaattggtttcttataaaaaactatgatgaagtagcgttggatttgcacattgttgag
ggtgacacaataggagtagaaaaggtgagagaaatgaaaaattttctgtacttaagccct
attcaatcagaatacaagatagccgtgatagatagcttagaagcaatgacgaacaacgct
aaaaatgcgatattaaaaatattagaagagccgccaaagaactctaaaatattcataatt
agccacaagccatacaatatacaaaccactatcaaatgtaggtgctttcagctaaattta
ctgccgctgacttatgatgaaacgaagcaaatcgtttcatctcaatgtaaatttgatgac
caaacattcgatgaaattattaccttattccctggaacgccaggaatgataataaatgct
ataagtagcgatacctatgaatcatacaaatgcttttatacgttccttcgtaatttaaat
aaccccgaagtaattaataaagtaataaacagcgaaatcgagctagaactagcatcatat
ataattcaagccttcgttttagacaaaataaaaggagaggtaaatggcgttgaaattttg
ctaagtaagtggaaaaaaatagatgaactttttgttgctgctaagcaactccacttagat
aaaaagcatgttctagctaatgcgattaatatcatagcgtcagtccactga
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