Wolbachia endosymbiont of Cimex lectularius: WCLE_011540
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Entry
WCLE_011540 CDS
T03628
Symbol
ihfB
Name
(GenBank) nucleoid DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
wcl
Wolbachia endosymbiont of Cimex lectularius
Brite
KEGG Orthology (KO) [BR:
wcl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcl03032
]
WCLE_011540 (ihfB)
03036 Chromosome and associated proteins [BR:
wcl03036
]
WCLE_011540 (ihfB)
03400 DNA repair and recombination proteins [BR:
wcl03400
]
WCLE_011540 (ihfB)
DNA replication proteins [BR:
wcl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
WCLE_011540 (ihfB)
Chromosome and associated proteins [BR:
wcl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
WCLE_011540 (ihfB)
DNA repair and recombination proteins [BR:
wcl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
WCLE_011540 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Inos-1-P_synth
HU-CCDC81_euk_1
HU-HIG
HU-CCDC81_euk_2
RE_ScaI
Motif
Other DBs
NCBI-ProteinID:
BAP00436
UniProt:
A0A060Q507
LinkDB
All DBs
Position
1137848..1138126
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AA seq
92 aa
AA seq
DB search
MATKSNIITKVAEKHPFLDKMVIAAIVNRFFEILSSTLKCHNRIEIRGFGSFSIRSYNLK
ETSHFMSQKFVKNQYFKTYFRSSKKLSYLINE
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgaaatctaacatcataacaaaggtggcagagaagcatcctttcctagacaaa
atggttatagcagctatagtcaacagattttttgagatactttcgagtacattgaagtgt
cataatagaattgaaattaggggatttggctccttttcaattaggagttataacttgaaa
gagacaagtcactttatgtcacagaagtttgtaaaaaatcaatactttaaaacgtatttt
cgtagcagtaaaaaattatcctatttaataaatgaataa
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