Wohlfahrtiimonas chitiniclastica: PE074_00365
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Entry
PE074_00365 CDS
T09056
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PE074_00365 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wcn03019
]
PE074_00365 (pcnB)
Enzymes [BR:
wcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PE074_00365 (pcnB)
Messenger RNA biogenesis [BR:
wcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PE074_00365 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF6932
Motif
Other DBs
NCBI-ProteinID:
WHR55451
LinkDB
All DBs
Position
complement(77517..78743)
Genome browser
AA seq
408 aa
AA seq
DB search
MNKKIYTAQEHGLTRRFISKQALSVVQTLVDAGYEAYIVGGAVRDILLKKSPKDFDIATN
AHPEQIKRLFRNCRLVGRRFRLAHILFGRDIIEVATFRANSDDDEEHKDRKVGDDGFLIR
DNVYGTIEDDAVRRDFTINALYYDPIRNEVIDFTNGYEDLLQGQLNLIGDPAKRFREDPV
RMLRAVRFEVKLGFTMPETLINAINDMGYLLQTVSAARMFDEVVKLMLNGYGHQVYLRLR
HYHLFSQIFPQTERALIELGNPEDHLLIAALHNSDNRINDGFGASTYFLYSALLWEPFLD
EYHVLLADDIAPNEASTIAADKIIRKQQEFTMIPKRISAQMTDLWKFQFRLTHVKARKNR
GGVNKILHHPRFKAAFDFLLLRKDAFESSDIVDHADFWQKAWDSHQPE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaaaaatatatacagcgcaagaacatggattgacaagacgcttcatttcaaag
caagccctttcggtcgtccaaactttagtggatgcaggttatgaagcctacatcgtcggc
ggtgctgtgcgcgatattttattgaaaaaatctcccaaagattttgatattgccaccaat
gcacacccagaacaaatcaaaagattatttagaaattgtcgccttgtgggcagacgattt
cgtttagcgcacattttatttgggcgcgacatcattgaagtggccacttttcgtgccaat
tcagatgatgacgaagaacacaaagatcgcaaagtgggcgatgatggctttttgattcgt
gacaatgtctatggcaccatcgaagatgatgcagtgcgtcgcgattttaccatcaatgca
ctctactatgatcccattcgtaatgaggtgattgattttaccaatggttatgaagattta
ttgcagggtcaattaaatttaattggcgatcctgccaagcgttttcgtgaagatccggtg
cgcatgttgcgtgcagtgcgctttgaggtcaagctcggttttaccatgccagagaccctc
atcaatgccatcaatgacatgggttatttattgcaaacggtctctgcggcgcgtatgttt
gatgaagtggtcaaactcatgctcaacggttatgggcatcaagtctatttacgtttgcgt
cattatcatttattcagccagattttcccgcaaacggagcgcgcattgatcgagcttggc
aaccctgaggatcatttattgatcgcggcgttacacaactcggacaatcgcatcaatgat
ggctttggcgcttccacatattttctctattctgcattattgtgggaaccgtttttagat
gaatatcatgtgttgctcgccgatgacattgcgccgaatgaagcgagtacgattgctgcc
gataagatcattcgtaagcagcaggaattcaccatgattcctaagcgcatcagtgcacag
atgacggatttatggaagttccaattccgcttaactcatgttaaagctcgtaaaaatcgt
ggcggcgtgaataaaattttgcatcatcctcgttttaaagcggcctttgattttctattg
ctgcgtaaagatgcatttgaatcatcggacattgtggatcatgccgacttttggcaaaaa
gcatgggacagtcatcagccagaatga
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