Wohlfahrtiimonas chitiniclastica: PE074_02260
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Entry
PE074_02260 CDS
T09056
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wcn03016
]
PE074_02260 (truB)
Enzymes [BR:
wcn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PE074_02260 (truB)
Transfer RNA biogenesis [BR:
wcn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PE074_02260 (truB)
Prokaryotic type
PE074_02260 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WHR55801
LinkDB
All DBs
Position
complement(480026..480940)
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AA seq
304 aa
AA seq
DB search
MSKTAKIKRRPLDGVLLLDKPKGVSSNNILQKVKYLYRAVKAGHAGTLDPMATGLLPICF
GEASKFNHQLLNNRKTYRFTCRLGEATHTGDAEGEVIATAMIPELSTALLETAMVNFTGD
IQQIPPMVSALHHDGKRLYELAREGIEVARPARDITIYALTLIEFDDHSFTAEVTCSKGT
YVRVLAEDIAKSIGTLGHLTMLRRTEVAPYFAPTLITMEDLEAALLENRADELLLPVDSA
IADYPILIFNEEETARLKNGQKIAFPHALDEQFYRLYAYDQTFLGLGERHLPHVIKPSRL
IQIQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacagctaaaatcaagcgccgtccattggatggcgttttacttttagataag
ccaaaaggcgtatcaagtaataacattctgcagaaggtcaaatatttatatcgcgctgta
aaagctgggcatgcgggcacattagatccaatggccacaggtttattgcccatttgtttt
ggcgaagcgagtaaatttaaccatcagcttttaaataaccgcaaaacgtatcgtttcacg
tgtcgtttaggggaagcaacccacacaggcgatgctgagggcgaagtgattgcgacagcg
atgattcctgagttatccacagccttattagaaacggcgatggtgaactttacgggtgac
attcagcaaattccaccgatggtttcagcattgcatcatgacggtaaacgcctgtatgag
cttgcgcgtgaaggcattgaggtggcgcgccctgctcgcgacatcaccatttatgcattg
acgctgattgagtttgatgatcacagctttacggctgaagtgacctgctcaaaagggaca
tatgtgcgtgtgttagccgaagacattgccaaatccatcggtacgcttggccatttaacc
atgctgcgccgaacggaagttgcgccttattttgccccaacgttgattacgatggaagat
ttagaggctgcgcttttagagaatcgtgcagatgagctgttattgcctgttgatagtgcg
attgcagattatcccattttgattttcaacgaggaagagacggcgcgcttgaaaaatggg
caaaagattgcgtttccccatgcattagatgagcaattttatcgtttatatgcgtatgat
cagacctttttaggtttaggagaacgtcatttaccccatgtcattaagccttcgcgcttg
attcaaatacaatga
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