Wohlfahrtiimonas chitiniclastica: PE074_04740
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Entry
PE074_04740 CDS
T09056
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wcn03009
]
PE074_04740 (rimO)
Enzymes [BR:
wcn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PE074_04740 (rimO)
Ribosome biogenesis [BR:
wcn03009
]
Prokaryotic type
ribosomal protein modification factors
PE074_04740 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WHR56271
LinkDB
All DBs
Position
964872..966188
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AA seq
438 aa
AA seq
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MTTPKIGFVSLGCPKALVDSEYILTQLRTEGYEIVPQYNDADLVVVNTCGFIDSAVQESL
DAIGEALDENGKVIVTGCLGAKADTILEKYPNVLSVTGPHAFQELMGAVHHHLPKPHDPF
MDLVPQAGIKLTPRHYAYLKIAEGCNHSCTFCIIPTMRGKHQSYPVENVLSQAKKLVNSG
VKELLVVAQDTSAYGVDVKYKTGFADGTPVRTHIQNLCEELGKMDAWVRLHYIYPYPHVD
HLIPLMAEGKILPYIDVPMQHASPRILKAMKRPANSENMLMRIKKWREICPEITIRSTFI
VGFPGETEEEFQMLLDFIEEARLDRVGAFIYSPVEGAPANDIAELIPVEIQEERLGRFME
LQARISAEKLALKVGQTLEVLVDDFDADNGVAIGRTKADAPEIDGLVYIDGADASCVGKI
VNVLIDEADTYDLYGELI
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
gtgactactcctaagattggctttgtttcgctcggttgcccaaaagcattggttgactcc
gaatatatcttgacgcaattgcgtactgaaggatatgaaatcgttccacaatacaatgat
gcagacctcgttgtggtcaacacttgtggctttattgattcagcggtgcaagagagctta
gatgccattggtgaagcgttagatgaaaatggcaaagtgattgtcacaggttgtttaggt
gcaaaagcggacaccattttggaaaaatatccaaatgtattgagtgtgacaggtccgcat
gcattccaagaattgatgggcgctgtgcatcatcatttgccaaagccgcacgatcccttc
atggatttggtgccacaagcgggcattaaattgacgccgcgccattatgcataccttaaa
attgcagaagggtgtaatcacagttgtacgttctgcatcattccgacgatgcgtggtaaa
catcaatcatatcctgtggaaaatgtcttgtcacaggcgaaaaaattggtgaattcaggt
gtgaaagagctattggtggtggcgcaagataccagcgcttatggcgtcgatgtgaaatat
aaaacaggttttgccgatggcacacctgtcagaacacacattcaaaacctctgtgaagag
cttggtaaaatggatgcatgggtgcgtttacactacatctatccttatccacatgttgat
catttgattccattgatggcagaaggcaaaattttgccgtacatcgatgtgcccatgcaa
cacgcatccccacgcattttaaaagccatgaagcgccctgccaatagtgaaaatatgttg
atgcgcatcaaaaaatggcgtgaaatttgccctgaaatcaccattcgctcaactttcatt
gttggcttcccaggggaaacggaagaagagttccaaatgcttttagatttcattgaagaa
gcacgtttagatcgcgtgggggcattcatttattcaccggtggaaggcgcgcccgctaat
gatattgcagaactcattccggttgagattcaagaagagcgtttaggtcgctttatggag
cttcaagcccgcatttctgcagagaaattagcgcttaaagtgggtcagacgttagaagta
ttggtggatgactttgatgctgacaatggcgtggccattggccgcacaaaagctgatgct
cctgaaattgatggattggtttacatcgatggcgcggatgcatcgtgcgttggtaaaatt
gtcaatgtattgatcgatgaagcggacacttatgatttatatggtgagctcatctaa
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