Wohlfahrtiimonas chitiniclastica: PE074_04775
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Entry
PE074_04775 CDS
T09056
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PE074_04775 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcn03400
]
PE074_04775 (nfo)
Enzymes [BR:
wcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
PE074_04775 (nfo)
DNA repair and recombination proteins [BR:
wcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
PE074_04775 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
HpaB_N
Motif
Other DBs
NCBI-ProteinID:
WHR56278
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All DBs
Position
972117..972968
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AA seq
283 aa
AA seq
DB search
MTYFVGAHVSASGGVDLAPQRAKDIGANAFALFTKNQRQWKAKPLEPKVIANFKKECFKL
GFKGNQILPHDSYLINLGHPEEEGLTKSREAFLDEMQRCEQLGIELLNFHPGSHLNKINI
SDCLARIGESINIALDQTKNVVAVIENTAGQGTNLGFEFEQLAEIIHHVEDKSRVGVCID
TCHAFVAGYDLRTFEACEKTFTAFDEIVGNQYLRAMHLNDAKTDFESRVDRHASLGQGTI
GLGAFEYIMQHPQFEGIPLILETTNPDIWDQEIGLLRSFTQEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgacctattttgtgggcgcacatgtcagcgcatcaggtggtgtggatttagcaccgcag
cgagcgaaagatattggggcaaacgcatttgccttatttacgaaaaaccagcgccaatgg
aaggccaagccgcttgagccaaaagtgattgccaactttaaaaaggagtgcttcaaactc
ggttttaaaggcaatcagattttacctcatgacagttacctcattaacttagggcatccg
gaagaagagggactcaccaaatcccgtgaagcttttttagatgagatgcagcgctgtgag
cagttgggcattgagttgctgaactttcatccgggcagccatttaaataagatcaatatt
tctgactgtttagcacgcattggcgagtccattaacattgcattggatcaaaccaaaaat
gtggtggctgtgattgaaaacaccgcagggcaaggcaccaatttaggctttgaatttgag
cagcttgctgagatcattcaccatgtggaagataaaagccgcgtgggcgtgtgtattgat
acttgtcatgcctttgtggctgggtatgatttacgcacgtttgaagcgtgtgaaaaaacc
tttaccgcttttgatgagattgttgggaatcaatatttgcgtgcgatgcatctaaacgat
gcgaaaacagactttgaaagccgtgtggatcgccatgcaagcttaggacaaggcaccatt
ggtttaggggcgtttgaatacattatgcagcacccacaatttgaaggcattcctttaatt
ttagaaaccaccaatcctgacatttgggatcaagagatcggtttattgcgcagttttaca
caggaagcatga
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