Wohlfahrtiimonas chitiniclastica: PE074_04880
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Entry
PE074_04880 CDS
T09056
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn03420
Nucleotide excision repair
wcn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PE074_04880 (uvrD)
03430 Mismatch repair
PE074_04880 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcn03400
]
PE074_04880 (uvrD)
Enzymes [BR:
wcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PE074_04880 (uvrD)
DNA repair and recombination proteins [BR:
wcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PE074_04880 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PE074_04880 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_11
AAA_30
PcrA_UvrD_tudor
DUF3553
Sial-lect-inser
Motif
Other DBs
NCBI-ProteinID:
WHR56299
LinkDB
All DBs
Position
complement(992162..994345)
Genome browser
AA seq
727 aa
AA seq
DB search
MSMLESLNNAQYDAVTAPLGPVRVLAGAGSGKTRVLVARIAWLIETEQTTPHGILAVTFT
NKAALEMRTRLETVLNRPLRSLWLGTFHSLCHRLLRLHPTEAHLDPNFQIMDSDDQLRLC
KRLLKERNVDDKIVTAKTLQSFINHQKDEGRRASHIERGHNFAHNMMIDLYAQYQSICAQ
SSLVDFSEILLRTLEMLRSNDALLKHYQQRFKFVLVDEFQDTNSIQYAWLKLLSGGHQQI
FVVGDDDQSIYGWRGARVENILNFDQDFPNSTTVRLEQNYRSTSTILEAANHVIAKNSER
LDKKLWTENKDDSLITQYAAMDAYEEAQYVVDQIKIATLKGTPRAEQAILYRSNAQSRIF
EEILLRANIPYRIYGGLRFFDRMEIKDIISYLRLIVNPHDDISFERAITTPAKGVGAATI
EKIRLEAMQTEVSLWTAMQNTLESQLLAKRAQNALMSFKLLIENLADALSDLTLDQFIQE
VIDRVELEAHYKKEPMGRGEDRIENLNEFISASRQFVEDYNNDPAAQPLTMHGYLAEFLG
RITLDSTANSDDDQEDKVQLMTLHSSKGLEFEHVYLVGMDDGLFPSESSMNDPARLEEER
RLAYVGITRAKRLLTLTTAASRMIHGKTIHLTPSCFVKDIPSPLVQMKGAKVSISKPMTA
RSSSHTSASQDQAMNGFALGQTVTHPVFGDGVITNFEGVGNHARVTVNFRTAGQKTLVMA
YAKLTAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttgaatcattaaataatgctcaatatgatgccgtcactgcccctttaggt
cctgttcgtgtgctcgcaggtgcaggctcaggtaaaacccgcgtgttagtggcacgcatt
gcatggctcattgaaacagaacaaacaacgccgcatggcattttagctgtaaccttcacc
aataaagccgcccttgagatgcgcacgcgtttagaaaccgtcctcaatcgcccattaaga
agtttatggcttggcacgttccattcattgtgccaccgtttgttgcgtttacacccaaca
gaagcgcaccttgatcctaactttcagatcatggacagcgatgatcaattgcgtttatgt
aagcgcctattaaaagaacgcaatgttgatgataaaattgtcaccgcaaaaaccttacag
agcttcatcaatcaccagaaagatgaagggcgcagagcaagccacattgagcgcggtcac
aactttgcccacaatatgatgattgatctgtatgcacaatatcaatccatctgcgcacaa
tcaagcttggtggatttttcagagattttactgcgcactttagagatgctcagaagcaat
gatgctttacttaaacattatcagcagcgctttaaatttgtgttggtggatgaattccaa
gacaccaacagcattcaatatgcatggttaaaacttttaagcggcggacatcaacaaatc
tttgtggttggcgatgatgatcagtccatttatggctggcgtggtgcgcgtgtggaaaac
atcctcaattttgatcaagatttcccaaacagcaccaccgtgcgtttagaacaaaattac
cgctccacatccaccattttagaagcggcaaaccatgtgatcgctaaaaacagcgagcgc
ctcgataaaaagctctggacagagaataaagatgattccctcatcacgcaatatgcagca
atggatgcctatgaagaggcacaatatgtggtggatcaaatcaaaatcgccacattaaaa
ggcacgccacgcgctgagcaagcaattttgtatcgctcaaatgcgcaatcacgtattttt
gaagagattttattgcgtgctaacattccatatcgcatctatggcggtttgcgcttcttt
gatcgcatggagattaaggacatcatcagctatttacgtttgattgtgaatccgcacgat
gacatctcctttgagcgcgccatcacaacgcctgctaaaggcgtgggcgctgcaaccatt
gagaaaatccgtttagaggcgatgcaaacagaagtgtcactctggactgcaatgcaaaat
acactcgaaagccaattgctcgcaaaacgtgcacaaaacgcattgatgagctttaaatta
ttgattgaaaatttagccgatgccctttctgatttaacgttagatcaattcattcaagag
gtgattgatcgtgtggaactcgaagcccattataaaaaagagcccatgggacgcggtgaa
gatcgcattgaaaacctcaatgaattcatctccgcaagccgtcaatttgtggaggattat
aacaatgatcctgccgctcagcctttgaccatgcacggttatttagcagaatttttagga
cgcatcacgcttgattccacagcaaacagcgatgatgatcaggaagacaaagtccaattg
atgacgctgcacagctctaaagggcttgaatttgaacatgtctatttagtgggcatggac
gatggcttattcccaagcgaaagctccatgaatgatcctgcccgcttagaagaagaacgt
cgcttagcgtatgtgggcatcacgcgcgcaaaacgtttattgaccttaaccacggctgct
tcacgcatgattcatggcaaaaccatccatttgacgccctcatgctttgttaaagacatt
ccgagtccattggtgcagatgaaaggcgcaaaagtgagcatctctaaaccgatgacggcg
cgttcaagcagtcatacaagtgcatcacaagatcaagccatgaatggttttgcccttggg
caaacggtgacgcatccggtctttggcgatggcgtcatcacgaactttgagggcgttggc
aatcatgcacgtgtcaccgtgaattttagaaccgcagggcaaaaaaccttagtgatggca
tatgcaaaactcactgcgatttga
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