Wohlfahrtiimonas chitiniclastica: PE074_05320
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Entry
PE074_05320 CDS
T09056
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PE074_05320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcn03400
]
PE074_05320
Enzymes [BR:
wcn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PE074_05320
DNA repair and recombination proteins [BR:
wcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PE074_05320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WHR54521
LinkDB
All DBs
Position
1080985..1081812
Genome browser
AA seq
275 aa
AA seq
DB search
MTDQHAQYLRLLKIPLWHSRTGGDPAYEIEITAEIEERARISLPPLPEVAPVAPPVEVMR
APKPVEMPESQPIVPVAKPQPTISAAEPYMAEAISRSTHAIHIDAAMCSACQLSKARTRV
VKGAGHAKARLMVITEAPTLQEDIAGQPLAGRAGQLFDEMLKAVKYSRDDVFITPYVKCA
PLQSLISAAEEAECSGHLLNEMIAQMPERILILGRHAARAVLNVQLPFEQLRTGQFHLKV
DGRAIPVQVSYNPYQLLKFPEEKRNAWQDMKRLIG
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaacacgctcaataccttcgattattaaagatcccactgtggcattcacgc
accggtggtgatcctgcttatgagattgaaatcaccgctgagattgaagagcgcgcgcga
atctcattgccaccattgcctgaagttgcacctgttgcaccgcctgttgaggtcatgcgc
gcacctaagccggtggaaatgccagagagtcagccgattgtaccggtggcaaaaccacag
ccgacaatcagtgccgctgagccatatatggctgaggccatcagccgcagtacgcatgcg
atacacatcgatgcggcaatgtgcagcgcttgtcaattgtcgaaagcacgcacgcgagtg
gtcaaaggcgcggggcatgcaaaggcgcgattgatggtcattacagaagcgccgacgctt
caagaggacattgccggtcagcctttagccgggcgcgctgggcagctctttgatgagatg
ctcaaagcagttaaatattcgcgcgatgatgttttcatcacgccttatgtaaaatgcgcc
cctttgcaaagtttgatcagcgccgctgaagaggcagaatgctcggggcatttactcaat
gagatgatcgcacagatgcctgagcgcattttgattttaggccgtcatgctgcgcgcgcg
gtcttgaatgtgcaattgccatttgaacaactgcgcactgggcaatttcacctgaaggtg
gatgggcgggcgataccggtgcaagtcagttataatccttaccaattattaaaattccct
gaagagaaacgcaacgcctggcaagacatgaaaaggctgataggataa
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