Wohlfahrtiimonas chitiniclastica: PE074_05340
Help
Entry
PE074_05340 CDS
T09056
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn03410
Base excision repair
wcn03430
Mismatch repair
wcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PE074_05340 (recJ)
03430 Mismatch repair
PE074_05340 (recJ)
03440 Homologous recombination
PE074_05340 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wcn03400
]
PE074_05340 (recJ)
DNA repair and recombination proteins [BR:
wcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PE074_05340 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PE074_05340 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PE074_05340 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WHR54525
LinkDB
All DBs
Position
1083544..1085250
Genome browser
AA seq
568 aa
AA seq
DB search
MIITERTVSTAATLSTVPLLNRVLQRRNFQSIEDLTFSLKDMCPPSTLEGCEAAGERIAQ
AVMHQQSILIVGDYDVDGATSTALMMRLLRAFGAESVRYRIPNRMLDGYGLTTPLLEEIV
AKDQPELIITVDNGISSIEAIERANQYGIEVIVTDHHLPGDVLPNAAVIVNPNLVGSAFE
SRALCGVGVAFYVLTATRRALLTHGYLSKETAPNLGDYLDLVALGTISDLVPLDRNNRCL
VQQGIERIRRGRTCVGIEALLAVSGKNQSELSTTDIAFGISPLLNAAGRLDDMRVGIECL
LTDSRQQAAYYAERLFEFNQERKEIERSMTAETQHILDAITLNADALPSALALYDASWHQ
GVIGIVASRVKERFDRPTFIFAKESDELLKGSGRSIAGIHLRDVIDEIATENPGIIKQFG
GHAMAAGLTLYESRLEDFRAALNQKVEKLWGGLDQKVMYTDGPLSPNDLTIEHAGILKTA
MPWGQMFPEPLFDNTFEVVDVKILKNLHLKLTLKHLEANLYFDGIAFFKAPDWQEKTQKV
RCLYKLDVNEWRGRRSLQLLIDHIEMES
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgatcattactgaacgcactgtgagcacagcggcgactttaagcactgtgccgttatta
aatcgcgtcttgcagcgccgaaattttcaatccatcgaagatttgacctttagtcttaag
gatatgtgtccgccttctactttagaaggctgtgaagcagctggggagcgcattgctcaa
gctgtgatgcatcagcaaagcattctgattgtgggcgattatgatgtcgatggcgcaacc
tcaactgctttaatgatgcgtttactgcgtgcctttggcgctgagtcggtgcgttatcgc
attcctaatcgtatgttagatggttatggattaacaacgcctttactggaagagatcgtg
gcaaaagatcagccagagctcatcatcacggtggataatggcatttcaagcattgaagcc
attgagcgcgcgaatcaatatggcattgaggtgattgtcacagatcaccatttgccgggt
gatgtattgccaaatgccgcggtgatcgtcaatcctaatttagtgggcagcgcatttgag
agtcgtgcgttgtgtggcgtgggcgttgcattttatgtgctgacagcaacgcgccgtgcg
cttttaacccatggttatttatcaaaagagactgcgccaaatctcggtgattatcttgat
ttggtggcgctgggtacaatttcagacttagtgccccttgatcgcaataatcgttgcctg
gtgcagcaaggcattgaacgcattcgccgtgggcgcacgtgtgttgggattgaggcatta
ttggccgtgtcgggtaaaaatcaatctgagctctccacaacggacattgcgtttggtatt
tcacctttactcaatgcggcggggcgtttagatgatatgcgcgttggtattgaatgttta
ttgacagattcaaggcagcaagcggcatattatgccgaacgattgtttgagtttaaccaa
gagcgtaaagagatcgagcgctcaatgacggcagaaacccaacacattttagatgccatc
actttaaatgcggatgcattgccaagtgcattggcgctgtatgatgcttcttggcatcaa
ggcgtgattggcattgtggcatcccgcgtcaaagagcgttttgatcgccccacgtttatt
tttgcaaaagagagcgatgagctgttaaaaggttcaggacgttcgattgcaggcattcat
ttacgtgatgtgatcgatgagattgccacagaaaatccaggcatcattaaacaattcggt
ggccatgcgatggcggcaggtttaacgttgtatgaatctcgtttagaggattttcgtgca
gcgttgaatcaaaaagttgagaaattatggggcggtttagatcagaaagtgatgtatacc
gatggtcctttatccccaaatgatctgaccattgaacatgcaggcatcctaaaaacagcg
atgccgtgggggcaaatgtttccagagccgctttttgacaatacttttgaagtggtggat
gttaagattttaaaaaatctgcaccttaaattgaccctaaagcatcttgaggccaatctc
tattttgatgggattgccttctttaaagccccagattggcaggaaaagacgcaaaaagta
cgatgtttatataaactcgatgtcaatgaatggcgcggacgacgatctttacaattgctc
attgaccacattgagatggaaagctaa
DBGET
integrated database retrieval system
