Wohlfahrtiimonas chitiniclastica: PE074_06080
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Entry
PE074_06080 CDS
T09056
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wcn03016
]
PE074_06080
Enzymes [BR:
wcn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PE074_06080
Transfer RNA biogenesis [BR:
wcn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PE074_06080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WHR54667
LinkDB
All DBs
Position
1226260..1227117
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AA seq
285 aa
AA seq
DB search
MTREYSFIDSDEALKQWIDDHADLTAIAVDTEFMRFRTYFSKLCLIQMATLDEAICIDPL
AITDFQPLLDLFVNPNIVKVFHSAGQDLEAIYNTFALIPTPIFDTQIAETVLGADHLLSY
QDTIEMRLNVLLEKAETRTDWEKRPLSKSQIEYAYDDVTYLYDVYLLLRDQIETAEEKRM
FKEKTDALYMVDKYAPNPEMAWMKVKGRKMLRGKRLQLLKLLAKKREEIAIKRDMPKRWV
VGDGALIDIAKEFSQPSMKSLVIFFEKSYMAPEFQPVIDEFISQQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactagagaatactctttcatcgacagcgatgaagcactcaaacagtggattgatgac
cacgcagacttaacagcaattgccgtagatacagagtttatgcgctttcgtacctatttc
tctaaattgtgtttgatccaaatggccacccttgatgaagcgatctgcattgatccttta
gccatcacagattttcagccgctgcttgatctttttgtgaatccgaacatcgttaaagtg
ttccattcagccgggcaagatttagaagccatttataatacatttgcgctcattcccacg
ccaatttttgacacgcaaattgccgaaacggtgcttggggcagatcatctattgagttat
caagacacgattgagatgcgtttaaatgtcttactagaaaaagccgaaacccgcaccgat
tgggaaaaacgcccattatctaagagccaaattgaatatgcttatgatgatgtgacatac
ttatacgatgtctatttattattgcgtgatcagatcgaaacggcagaagaaaagcgcatg
tttaaagagaaaaccgatgcgctctatatggtggataaatatgcgccgaatcctgaaatg
gcgtggatgaaggtcaaagggcgcaaaatgctcagaggcaagcgtttacagcttttgaaa
ttattggcaaaaaaacgtgaagagatcgccattaagcgtgacatgccaaagcgttgggtg
gtgggcgatggcgccttgatcgacattgctaaagagttcagtcagccttcgatgaagtcg
ctggtgattttctttgaaaaaagctacatggcacccgagtttcaacctgtgattgacgaa
tttatctcacaacaataa
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