Wohlfahrtiimonas chitiniclastica: PE074_06185
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Entry
PE074_06185 CDS
T09056
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wcn03009
]
PE074_06185 (dbpA)
Enzymes [BR:
wcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PE074_06185 (dbpA)
Ribosome biogenesis [BR:
wcn03009
]
Prokaryotic type
rRNA helicases
PE074_06185 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WHR54688
LinkDB
All DBs
Position
complement(1247541..1248926)
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AA seq
461 aa
AA seq
DB search
MQFSELPLPAAQLKNLQDLGYQSTTPIQAAALPAILKGKDLLGQAKTGSGKTAAFGIGVL
ESIDVTRFATQALVICPTRELADQVSKELRRLARYIPNLKISSICGGTPIARQIHAMSQH
PPHIAVGTPGRLLDHLKRNTLSLKSLKVLVLDEADRMLDMGFADEMDAIIEHAPRQRQTL
LFSATFPENIEAISARIQHNPVRVTVEETPADKPNIDQSVVIVDNQGAKAATTAALLYHY
APESTVIFCNTIAACQELEDYLFEQDIDVVSLHGDLEQRERDQVLLRFSNGSTRVLVATD
VAARGLDIADLSMVINYDLPFDPEVYVHRIGRTGRAGKTGIAVSLVVMDKLHRLQEIEKY
QDQTITQYPAEHFKDVKPISLIAKMSTIEISEGKKSKISAGDILGALTAKGEIAGKDVGK
ITLLPMQAYVAISRAHAKQAVDQIWKNPIKNIRCRARIIGD
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttctgaactccctttaccggctgcgcaacttaaaaaccttcaagatttgggt
tatcaatccacaacgcccattcaagctgcagccctaccggccattttaaaagggaaagat
ttgctgggccaagccaaaaccggcagcggtaaaacagccgccttcggcattggcgtgtta
gaaagcattgatgtcacgcgctttgccacgcaagctttggtgatttgccccacgcgtgaa
ctggccgatcaagtgagtaaagaactgcgccgtttagcccgttacattccgaatcttaaa
atttcaagcatttgtggcggcacgccgattgcccgtcaaatccatgccatgagtcagcat
ccgccgcacattgctgtgggtacgcccggccgcttgttagatcatctcaaacgcaacaca
ttgagcctcaaatccctcaaagttttggtgctcgatgaagccgatcgcatgttagacatg
ggctttgccgatgaaatggatgccatcattgaacatgctccgcgtcaacgccaaaccttg
ctgttttcagccacattccctgagaacatcgaagccatcagcgcacgcattcaacacaat
cctgtgcgcgtaacggtggaagaaacacctgcggacaaaccaaacattgatcaatcggtt
gtcattgtggacaatcaaggtgcaaaagctgccacaaccgcagcgctgctttaccattat
gcgccagaatccaccgtcattttctgtaacaccattgccgcctgccaagagcttgaagat
tatctctttgagcaagacattgatgtggtctctcttcacggagaccttgaacagcgcgag
cgtgatcaagtgttattgcgctttagtaatggcagcacccgcgtattggtggcaaccgat
gtggcggcacgcggcttagacatcgctgatttatccatggtgatcaactatgatctgccc
tttgatcctgaagtgtacgtccatcgcattggccgcacaggtcgtgcgggtaaaactggc
attgccgtcagtttagtggtgatggataaattgcaccgtctccaagagattgaaaaatat
caagatcaaaccatcacgcaataccctgctgaacattttaaagatgttaagcccatctca
ttgatcgctaaaatgagcaccatcgagatcagcgaaggtaaaaaatccaaaatcagcgct
ggggatattttgggcgctttgacggcaaaaggtgaaatcgctgggaaagatgtgggaaaa
atcactctattgccgatgcaagcttatgtagccatcagtcgcgcacatgcaaaacaagcg
gtggatcaaatctggaaaaaccccatcaaaaatattcgctgccgcgcccgcatcattggg
gattaa
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