Wohlfahrtiimonas chitiniclastica: PE074_08330
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Entry
PE074_08330 CDS
T09056
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn03030
DNA replication
wcn03430
Mismatch repair
wcn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PE074_08330 (dnaE)
03430 Mismatch repair
PE074_08330 (dnaE)
03440 Homologous recombination
PE074_08330 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wcn03032
]
PE074_08330 (dnaE)
03400 DNA repair and recombination proteins [BR:
wcn03400
]
PE074_08330 (dnaE)
Enzymes [BR:
wcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PE074_08330 (dnaE)
DNA replication proteins [BR:
wcn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PE074_08330 (dnaE)
DNA repair and recombination proteins [BR:
wcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PE074_08330 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WHR55096
LinkDB
All DBs
Position
1719736..1723212
Genome browser
AA seq
1158 aa
AA seq
DB search
MRFVHLNLHTEFSISDGLIRIKPLFGQLKEQHVECVALTDMGNAFAAIKFYETALKNGIK
PIIGAECHLKNGHEYLGRMTLLAQNYKGYLNLSKLLSEGYRHGQERGVPHITYEWLNEFN
EGLILIAGKESPIGTTLLTLKEEDWGKSLAPFAAFKDRLYLGLSRTEQDSDEAFILAAKR
LAISHQLPLVAVNNVRFLHKSDFDAHEIRTCIQAGNVISDNKRPRLYSPEQYLKSPEEMI
ALFSDIPEAIENTVEIAKRCTVELSLGKPCLPNFPVPEGMTMDDYFRHLSYEGLKYRIGE
NHPQQKAYEERLKIELDVIINMGFPGYFLIVADFIQWSKDHDIPVGPGRGSGAGSLVAWA
LKITDLDPLPYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIEYVAEKYGRDAVSQIATH
GTMAAKAVIRDVGRALGHPYGFVDRIAKLIPFDLGITLDKALMQEPELHDLYEKDEEVKE
LIDYAKQLEGLTKSVGRHAGGVVISPTTITDFSPLYCEEGSEALVAQYDKSDVESAGLVK
FDFLGLRTLTIINWAIQNIQKTHGLEINILDIPLDDKAAFDLLKSCKTTAVFQLESRGMK
DLIRRLQPDTFEDIIALVALFRPGPLESGMVEDFINRKHGRAEIEYPFPELETVLAPTYG
VIVYQEQVMQISQVIGNYTLGGADLLRRAMGKKLPEEMEKQRGLFMQGAEELGFDKEKAG
ALFDLMEKFAGYGFNKSHSAAYALVSYQTAYLKAHYPAEFMAAVLSSDMDNTEKVVTFIE
ECEDMGLKILPPDVNRSHYKFTVSDKGEIIYGLGAIKGVGEAAALQAIDERQNNGRFVDL
FDFCRRIDLSKMNRRVVETLIKAGALDGLDPAVQSVEARCQFRADLLETLPDAIHSAEQH
HRNQNSGQEDLFGLFGDDAGSAVTITTPLKRGDAWSERMLLEHESATLGFYLTTHPINRY
RHEIKAITSHSIGEVLTMTQPGYRIARAAEPECTIAGIVIQMRTKINQKGQKMTFVTLDD
RTGRMELRLYDEHLENLNEPLSTKSILVVKGSLMWDEFNNGMRTRPLSIETIESTRNTMA
RALILHNKTSIDVARIEQLIETVANFRAAEGKPIYLKFQNHDANILIKLGPSWTVRLSDD
LLENVTRAFHDVSVKVKY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgtccacctcaatctacatacggagttctccatcagcgatggtttgatccgc
attaaaccattatttggtcagctgaaagaacaacatgtggagtgtgttgccttaacggac
atgggcaatgcctttgccgccattaagttttatgaaactgcccttaaaaatggcatcaaa
cccatcattggcgcagagtgccacctcaaaaatgggcatgaatacttaggacgcatgacg
ctccttgcgcaaaactataagggttatttgaatctctctaaattattgagtgaaggctat
cgtcacgggcaagagcgcggcgtgccgcacatcacctatgaatggctcaatgaattcaat
gaaggtttaatcctcattgcgggtaaagagagcccgattggcacaacgctcctcaccctt
aaagaagaagattggggcaaatctttagcgccctttgccgcctttaaagatcgtttatat
ttaggcttatcccgcacagaacaagacagtgatgaagccttcatccttgcagcaaagcgc
ttagcaatcagccatcaattgccacttgtggcggtgaataatgtgcgctttttacacaaa
agtgactttgatgcacatgaaattcgcacatgtatccaggctggcaatgtcatctctgac
aataaacgcccccgtttatacagccctgagcaatatttaaagtccccagaagagatgatc
gcgctcttttcagacatccctgaagccattgaaaatacggtggagatcgccaaacgctgc
accgttgagctctctttaggtaaaccttgtttgcccaatttccccgtgcctgaaggcatg
acaatggatgattatttccgtcatctttcctatgaggggcttaaataccgcattggggag
aatcacccacaacaaaaagcttatgaagagcgccttaaaattgagctcgatgtgatcatc
aacatgggcttcccgggttacttcttaatcgttgcggacttcattcaatggtcaaaagat
catgacattcctgtgggacccggccgtggttcaggtgcaggctcattggtggcatgggca
ctgaaaatcacagatttagatccactcccttatgatttactctttgagcgtttcttgaat
cctgaacgtgtttcaatgccggactttgacgtggacttttgcatggaaggccgcgaccgc
gtgattgaatatgtggcagaaaaatatggccgcgatgccgtctcccaaattgccacacat
ggcaccatggcagcaaaagcggtgattcgtgatgtgggacgcgccttagggcatccttat
ggctttgtggatcgcattgctaaactcattccttttgatcttggcatcactttagataag
gccttgatgcaagagcctgagctccatgatctttatgaaaaagatgaggaagtcaaagaa
ctcattgattatgccaaacaattagaaggcttaaccaaatccgtcggacgccatgccggt
ggcgttgtgatttcccccaccaccatcacggacttttccccattgtattgtgaagaaggc
agtgaagctttggtggcacaatatgataaaagtgatgtggagtcggcagggcttgtgaag
tttgacttcttgggattacgtacgctcaccatcatcaactgggccattcagaacatccaa
aaaacccatggccttgagatcaacattctcgacattccgctggatgataaagcggccttt
gatcttttaaaatcctgtaaaacaactgccgttttccaactagaatcccgcggcatgaag
gatttgatccgtcgtttacaaccggatacctttgaggacatcatcgcccttgtggcgctc
tttagaccgggcccgctagaatctggcatggtggaagacttcatcaaccgtaaacatggc
cgcgcagaaattgaatatcccttccctgagcttgaaacggtgcttgcgcccacttatggc
gtgattgtgtatcaagagcaagtgatgcagatttcccaagtcatcggtaattacacctta
ggcggcgcggatttattgcgccgtgcgatgggtaaaaagttgcctgaagagatggaaaaa
cagcgtggattattcatgcaaggggcagaagaattgggctttgataaagaaaaagccgga
gccctctttgatttgatggaaaaattcgcaggctacggctttaacaaatcccactctgct
gcgtatgcgttggtctcttatcaaacggcgtatctcaaagcccattatccggctgaattc
atggcggctgttttatcttctgacatggacaacaccgaaaaagtggtgaccttcattgaa
gagtgcgaagacatggggctcaaaattttaccgccagatgtcaatcgctcccattataaa
ttcaccgtcagcgataaaggcgaaatcatctatggccttggcgccattaagggcgttggt
gaggcggctgcattacaagccattgatgaaagacaaaacaatggtcgctttgtggatctg
tttgatttttgtcgccgcattgatttatccaaaatgaatcgccgcgttgtggaaactttg
atcaaagcaggtgcattagatggtttagatcctgccgttcaatcggtggaggcgcgctgt
cagttccgtgccgatcttttagaaaccttgcccgatgccattcattcagcagagcagcat
caccgcaatcaaaactcagggcaagaagatctctttggtttatttggcgatgatgcaggc
agtgctgtgaccattacaacaccgctcaaacgtggtgatgcatggtctgaacgcatgtta
ttagagcatgaaagtgccactttaggcttttatctcaccacacaccctattaaccgctac
cgccatgagatcaaagccatcacgagccactccatcggtgaagtgctcactatgacacag
cccggttaccgtatcgcgcgtgccgctgagcctgaatgcaccattgctggcatcgtgatt
caaatgcgcacaaaaatcaatcaaaagggtcaaaagatgacatttgtgacgttagatgac
cgcacaggacgtatggaactgcgtctttatgatgagcatttagaaaatttaaatgagccc
ttatcgacaaaaagcatcttagtggtcaaaggctctttaatgtgggatgaattcaacaat
ggcatgcgcacacgtccattgagcatcgaaaccattgaaagcacgagaaatacaatggcg
cgcgccttgattttgcacaataaaacctccattgatgtggcacgcatcgaacaactgatc
gaaacggtggctaattttagagcggcagagggcaaacccatttatttaaaatttcaaaac
catgacgccaatatcttgataaaattaggaccctcttggacagtgcgcctcagtgatgat
ttattggaaaatgtcacccgcgcgttccatgatgtctctgttaaagttaagtattaa
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