Wohlfahrtiimonas chitiniclastica: PE074_09450
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Entry
PE074_09450 CDS
T09056
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
wcn
Wohlfahrtiimonas chitiniclastica
Pathway
wcn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
wcn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PE074_09450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
wcn02022
]
PE074_09450
02035 Bacterial motility proteins [BR:
wcn02035
]
PE074_09450
Two-component system [BR:
wcn02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PE074_09450
Bacterial motility proteins [BR:
wcn02035
]
Pilus system
Twitching motility proteins
PE074_09450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
HTH_28
HTH_30
AAA_5
HTH_1
AAA_16
AAA_22
HTH_23
AAA_19
AAA
Motif
Other DBs
NCBI-ProteinID:
WHR55302
LinkDB
All DBs
Position
complement(1988242..1989633)
Genome browser
AA seq
463 aa
AA seq
DB search
MYKALIIDDEENICELISMSFLSIDIECVEAYSVSDAIVALQNEAFDVCLTDLKLPDGSG
FDVLRYIQDKVPNLPVAMMTAHGNVESAIEALKLGAFDFISKPFEINALRKLALNAVQTQ
KIPQVASKHGLYGDSVAMVSLRNQIRKLARSQSPIYITGESGVGKEVVARAIHAESPRFD
GPFIAVNCGALSEHLVESELFGHKKGSFTGADKDKKGLFQAADGGTLLLDEIADLPLSMQ
VKLLRAIQERAIRPIGAMHEIPVNVRILSASHKSLAALVDAGEFRQDLFYRLNVISLYVP
PLRERRGDVAILVKVILERLNHDNGRAVTITEGALRRLDHYAFPGNVRELENILERASTL
CDGDVIEEKDLLLNSNNELVLVEPVNAPTEDQSIPMIETGDQDDPVIPDHIDDIEAYLAA
VERKILKRALAEHDSKTEAAKQLGISFRTFRYRLKKLNIEDDD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagcgctcattattgatgatgaagagaacatctgcgaactgatctccatgagt
tttttatccattgatattgaatgtgtggaagcctattcagtctcagatgccattgtggca
ctgcaaaatgaagcctttgatgtctgtttgacggatctaaaattgcccgatggttcaggc
tttgatgtgctgcgttacattcaggataaagtgccgaatttaccagtggcgatgatgacg
gcgcatggcaatgtggaaagtgcgattgaagcgcttaagcttggcgcatttgattttatc
tctaagccttttgagatcaatgcactgcgtaaattagccctcaatgcggtgcaaacgcaa
aagatcccacaagtggcctctaaacatggtttatatggcgattctgtggcgatggtgtct
cttcgcaatcaaatccgtaaattggcgcgttcgcaatccccaatttacatcaccggtgaa
tcaggcgtcggtaaagaagtggtggcgcgtgcgattcatgcagaaagtccacgctttgat
ggacctttcattgccgtgaactgcggtgcgttatcggagcatttggtggaaagtgagctc
tttggccataaaaaggggagctttacaggtgccgataaagataaaaaagggctctttcag
gctgcggatggcggcacattgctgcttgatgaaattgccgatttaccgctctcaatgcag
gtgaaattactgcgagccattcaagagcgtgccattcgcccgattggtgcaatgcatgaa
atccccgtcaatgtgcggattttatcggcttctcataaaagtttagcggcgcttgtggat
gccggtgagtttcgtcaggatcttttttaccgtttaaatgtgatttcgctatatgtgccg
ccgttgcgtgagcgtcggggcgatgtggcgattttggttaaagtgattttagagcgtttg
aatcatgacaatggccgcgctgtgacgatcacagaaggcgccttgcgtcgtttagatcat
tatgcatttcccggcaatgtgcgtgagcttgagaacatcttagagcgagcttcaacgctg
tgtgatggggatgtgattgaggaaaaagatttattgcttaattcaaacaatgaattagta
ttagtagagccagtcaatgcaccgacagaggatcaatcgatcccgatgattgaaacgggg
gatcaggatgatcctgtgattcccgatcacatcgatgacattgaggcatatttagccgcc
gttgagcgtaaaattctcaaacgggcattggcagaacatgacagcaaaaccgaggcggcg
aaacagttgggcatctcctttcgaacctttcgctatcgattaaaaaaactcaacatagag
gacgatgattaa
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