Weissella coleopterorum: G7084_01855
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Entry
G7084_01855 CDS
T07450
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
wco
Weissella coleopterorum
Brite
KEGG Orthology (KO) [BR:
wco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wco03009
]
G7084_01855 (rlmD)
Enzymes [BR:
wco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
G7084_01855 (rlmD)
Ribosome biogenesis [BR:
wco03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
G7084_01855 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
PrmA
Methyltransf_PK
Motif
Other DBs
NCBI-ProteinID:
QIL50177
UniProt:
A0A6G8AYV9
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All DBs
Position
342433..343812
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AA seq
459 aa
AA seq
DB search
MPRNILPVKLNEIKEGVVTDILHNGMGVIMVDQHYPVKLVDAFLGEKIRCRLTQVDRLSA
YGEVLTVVKPSADRQNQNKAYLLEAGVAPYVNLSYSGQLKLKRRQVEQAFAAVDLKLPVA
ATIGADQPTHYRNKTVVPLKNQNGHLTTGFFDRKNKDTIVPMDDYYLNDPIIDQTIGIVR
DILDQFKTPIYNDVTKQGAMRYIMVRRGYYSQQVMVVLVSHLAQIPDEAAIAQAIVEQVP
ALKSLILNHNPRQTSQQLTGDNRVLWGDAAIHDQLLGHDFVIGPNSFYQVNPKTTEVLYQ
LAAQMGELKASDHAIDAYSGIGTIGLSIADQVQQVYGVEVVERAVEDAKINIAQNQIKNA
QYIAADAPVQMEKWRDENLPADIIFVDPPRRGLTETLMDAMVYLNPDRVVYVSCNPVTMA
RDIKYMTEHGYQVQGPIQPLDQFPQTAHVECVALLVNKH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaaatattctgcctgtaaaattaaatgaaattaaagaaggcgtggtcacagac
atcttacataatgggatgggcgtgatcatggttgatcaacactatccagtaaagttagtg
gatgcttttttaggtgaaaaaattcggtgtcgtttgacccaggttgatcgcttatcggca
tacggtgaggtcctgacggttgtaaaaccgtccgcggatcggcagaatcaaaataaagca
tatctgcttgaagcgggggtggcgccgtatgtgaacttaagttattcggggcaattgaag
ttaaaacggcgacaggtcgaacaagcgtttgcggccgttgatttaaagctccctgtggca
gccaccattggagcagaccaaccaacgcattatcgtaataagacggtcgtgcctttgaaa
aatcaaaatgggcatctgacaactggtttctttgatcggaaaaataaagataccattgtc
ccgatggatgattattatttgaatgatcctatcatcgatcaaacgattgggattgtccgt
gatattttggatcaatttaagacgccaatttataatgatgtcactaagcaaggtgccatg
cgctatattatggtgcgacgcggatattattcgcagcaagtcatggtcgttttggtcagc
cacttggcgcaaataccagatgaagccgcgattgcacaagccattgtggaacaagtcccg
gccttgaaaagtttaatcttaaatcataatccacgtcaaacaagtcaacaattgaccggt
gataatcgcgttttgtggggggatgcagctattcatgaccaattacttgggcatgacttt
gtgattggaccaaattctttttatcaagttaatcctaaaacgaccgaagttctctaccaa
ttggccgcacagatgggcgaattgaaagcaagtgatcatgctattgatgcatactcgggg
attggaacgattggtctttcgattgcagatcaagttcagcaagtttacggagttgaggta
gtggagcgagcggttgaagacgctaaaataaatattgcgcaaaatcaaattaaaaatgcg
caatatattgcagctgacgctccagtccagatggaaaagtggcgagatgaaaatttacct
gctgatatcatctttgtggatccgccacggcgtggcttaacggaaacattaatggatgcc
atggtgtatcttaatccagaccgggtggtttatgtttcatgtaacccggttacgatggcg
cgggatattaaatatatgacggaacatgggtatcaagtgcaaggaccgattcagcccctt
gatcagtttccacagacagcacacgttgaatgtgtggctttattagtcaataagcattaa
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