Weissella coleopterorum: G7084_02340
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Entry
G7084_02340 CDS
T07450
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
wco
Weissella coleopterorum
Pathway
wco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7084_02340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wco03019
]
G7084_02340
03009 Ribosome biogenesis [BR:
wco03009
]
G7084_02340
Enzymes [BR:
wco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G7084_02340
Messenger RNA biogenesis [BR:
wco03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G7084_02340
Ribosome biogenesis [BR:
wco03009
]
Prokaryotic type
rRNA helicases
G7084_02340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5791
Helicase_RecD
CMS1
GRP
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QIL50266
UniProt:
A0A6G8AZ34
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All DBs
Position
435895..437469
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AA seq
524 aa
AA seq
DB search
MKFSELGLTKDLLTAIEKHGYVEATPIQAETIPLTLAGKDVIGQAQTGTGKTAAFGLPIL
EMIDSSRQVQALVVSPTRELAIQTQEELFKLGRDKRVRVQAVFGGADIRRQIDGLKRGVD
IVVGTPGRLIDHIRRGTIDLSHVRTLVLDEADEMLNMGFLEDIESILKAVPSERQTLLFS
ATMPPAIKRIGVQFMTEPEHIQVAAKELTTDLVDQYYVRVREPEKFDTLTNILAVQQPKL
AILFGRTKRRVDELTRGLELRGFKASGIHGDLTQQKRTQVLKSFKAGEIQILVATDVAAR
GLDVSGVTHVYNFDIPQESESYVHRIGRTGRAGSHGTSVTFVTNSELDYLKDIEKLTKKR
MLALKPYSHEEAVAARMKTAVQDVDAVVKTVDANLVSEEVDELLEKYDIRTLAAAALAAS
ANIAEIDAEFDLTRERPLPNKRFGRGGSRGGGSRGNYRGGNRRSGSGGGSRGGRREENGN
RGGGHDSERRKSYDRGSRTGSGDRSQRGSRPVGRRKFVIRENDK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgaagttttcagaattaggtctcacaaaagacctacttacagccattgaaaaacatggc
tatgtcgaggcaacaccaattcaagccgaaacaattcccttaacgctagccggtaaggat
gtcatcggtcaagctcaaaccggaactggtaaaacagctgcgtttgggttgcctatttta
gagatgattgatagtagtcgtcaagttcaagctttggtagtttcaccaacgcgtgaatta
gcgattcaaacgcaagaagaattatttaaattaggacgcgacaagcgtgtccgcgtgcaa
gctgtctttggtggagctgatattcgccgccaaattgatggtttgaagcggggagtcgac
atcgttgttggaactcctggtcgcttaattgaccatatccgtcgtggaaccattgacctt
tcacatgtccggactttagttttggatgaagctgatgaaatgttaaatatgggattcttg
gaagatattgaatcaattttgaaggctgtgccaagtgaacgacaaactttgttgttctca
gcaacgatgccaccggcaatcaagcggattggtgttcagttcatgacggaacctgaacac
attcaagtagctgctaaagaattgacaacggacttagttgatcaatactatgttcgagta
cgcgagccggaaaagtttgatactttgactaatattttggctgtgcaacaaccaaaatta
gcaattttgtttggtcggacaaagcgccgagttgatgaattaactcgtggcctagaatta
cgcggctttaaagcttcaggaattcacggtgacctaacgcaacaaaagcgtacccaagtt
ttgaagtctttcaaagctggtgagattcaaatcttagtggcaaccgacgttgctgcacgt
ggattagatgtttctggtgtaacgcacgtttataactttgatattccacaagaatcagaa
tcatacgttcaccgaattggtcggacaggacgtgctgggtctcacggaacttcagttacg
tttgttactaattctgaattagattacttaaaggacattgagaagcttactaagaagcgg
atgttggccttgaagccttactcacatgaagaagctgtggctgctcgaatgaagactgca
gtccaagatgtggatgctgtggtcaaaacggttgatgcaaacttagtttcagaagaagtt
gatgagctattagaaaagtatgatattcgtactttggctgcagctgcattggctgcttca
gctaatatcgctgaaattgatgctgaatttgatttgacccgtgaacgtccattgccaaac
aaacgctttggtcgtggtggatcacgtggtggtggatcacgcggtaactaccgtggtggc
aatcgtcgttctggtagtggtggtggatcacgcggtggtcgtcgtgaagaaaatggtaac
cgtggtggtggtcatgattcagaacgtcgtaagtcatatgaccgtggttcacggactgga
tcaggagaccgttcacaacgtggttcacgcccagttggacgtcgtaagtttgtaattcgc
gagaatgataaataa
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