Wujia chipingensis: H9Q76_05970
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Entry
H9Q76_05970 CDS
T08109
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
wcp
Wujia chipingensis
Pathway
wcp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wcp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9Q76_05970 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wcp03019
]
H9Q76_05970 (rny)
Messenger RNA biogenesis [BR:
wcp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9Q76_05970 (rny)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
QNM00817
UniProt:
A0A7G9FQI5
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Position
1270912..1272474
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AA seq
520 aa
AA seq
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MSDEAIKYVIFAVILVVAILVTWFLAIAYRKNVAEAKLGKAEDKAREIIDEALKAAEAKK
RETLLEAKEEAMKTKNEIDKEVKDRRNELQRMEKRVLSREENLDRKTEAVEKKEASLSRK
EAELTKLKQEVSDLEAKRTQELERISGLTSEQAKEYLLKTVEDEVKHETAVMIKELETRA
KEEADKKAKDYVVTAIQKCAVDHVSETTISLVQLPNDEMKGRIIGREGRNIRTLETMTGV
DLIIDDTPEAVLLSSFDPVRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVETMMREE
GEAATLEVGVHGLHPELIRLLGKMKFRTSYGQNALKHSIEVAHLSGLLAGELGLDVRVAK
RAGLLHDIGKSIDHDAGMEGSHVSIGVDLCRKYKESATIINAVEAHHGDVEPQSLIACIV
QAADAISAARPGARRETLETYTTRLKSLEDIANGFKGVDKTFAIQAGREIRVMVVPEQVT
DADMVLLARDISKKIESELEYPGTIKVNLIRESRVTDYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagacgaagcaatcaagtatgtgattttcgctgtaatactcgtggttgcaattctc
gttacctggtttttagctattgcgtatcgtaaaaatgtggcagaggcaaagcttggtaag
gcagaggataaggctagagagattatagatgaagcactgaaagctgcggaggcaaagaaa
cgtgagacacttcttgaggcgaaggaagaagccatgaagacgaagaatgagattgacaaa
gaagtcaaggatcgtcggaatgagcttcagcgcatggaaaagcgtgttctttccagagag
gaaaatctcgaccggaagaccgaagccgtagagaagaaagaagcttcattatcacgtaaa
gaggcagaactcacgaagctgaagcaggaagtttcagatttggaagcaaaaagaactcag
gaactggaaagaatttccggattaacctctgaacaagcaaaggaatacttattaaagact
gttgaagacgaagtaaagcatgaaacagcagtcatgatcaaagaattagaaacacgagca
aaagaagaagcagataagaaggcaaaggattacgttgtgacagctattcagaagtgtgct
gttgatcatgtatcagagacaacgatttccttagtacagttgcctaacgatgagatgaag
ggaagaatcattggtcgtgaaggacgaaacattcgtactttagagactatgacaggtgtt
gatttaattattgatgatacaccggaagcagttttgctttcaagttttgatccggttcgt
agagaagtagccagaatcgcacttgaaaagctgattgtggatggaagaatccatccggca
cgtattgaagagatggtcgagaaggctcagaaagaggtcgagactatgatgcgtgaagag
ggagaggctgcaaccctggaagtcggtgtacatggcttacatcctgaactgatacgtctt
cttggtaagatgaagttcagaacaagttatggacagaatgcattgaagcattctattgag
gtagctcatttgtccggtttgcttgccggagagcttgggcttgatgttcgtgtagcaaag
cgtgcaggtttgttacatgatatcggaaaatctattgatcatgatgcaggtatggaaggt
tctcacgtatccattggtgttgatctttgtagaaagtacaaagagtcggcaacgattatc
aacgctgttgaggcacaccacggggatgtagaaccacagagtttgatcgcatgtattgta
caggctgcagatgctatatctgctgcacgtccaggtgcaagacgcgagacgttggagaca
tatacaacacgtctgaagtccttggaagacattgccaatggatttaagggtgttgataag
acttttgctattcaggcgggacgagaaattcgagtaatggtagttccagagcaggtaaca
gatgcggatatggtattactcgcacgggatatctcaaagaagattgaatcagaacttgag
tatccgggcacaatcaaggtaaacttgatccgagagtcaagagtaaccgattacgcaaag
taa
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