Wujia chipingensis: H9Q76_13545
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Entry
H9Q76_13545 CDS
T08109
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
wcp
Wujia chipingensis
Brite
KEGG Orthology (KO) [BR:
wcp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
wcp03009
]
H9Q76_13545 (rlmD)
Enzymes [BR:
wcp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
H9Q76_13545 (rlmD)
Ribosome biogenesis [BR:
wcp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9Q76_13545 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
MTS
N6_N4_Mtase
Methyltransf_25
Methyltransf_4
PrmA
PCMT
Methyltr_RsmB-F
RrnaAD
UPF0020
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QNL99709
UniProt:
A0A7G9FMC8
LinkDB
All DBs
Position
complement(2910939..2912441)
Genome browser
AA seq
500 aa
AA seq
DB search
MTKQGRYKQSGEQSKKHVHVSENGHTGNKSGCPISKKCGGCQYIDKSYAEQLKIKTDQVK
KLLAPYGSVDEIIGMKEPYHYRNKVNAAFQHKRNGEILAGVYEEGTHRVLSVDDCKIENR
LAQEIVETIRGLLRSFKITVYNEDSGYGLLRHVMIRTGHATGEVMVVLVTASPIFPSKKN
FAKALVKAHPQITTIVQNINDKDTSMVLGERNQVLYGRGFIEDKLCGKTFKISPTSFYQV
NPVQTELLYNKAMEYANLTGEEVVVDAYCGTGTIGIVASDHAKQVIGVELNKAAAKDAIT
NVKRNECKNVRIYDGDAGKFMVGMAEAGTDVDVVFLDPPRSGSTPEFFDSVCKLAPKRIV
YISCGPESLARDLKYLKSKRMYQVEKIALVDLFPWTEHCETVVLLSQRKADDYVEVELEL
DELDVTSAESKATYAEIKDYVLKEHGLKVSNLYISQVKRKCGIEVGENYNLPKSEDSRQP
QCPEEKEKAIKDALEHFGMI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcagggaagatacaagcagagtggtgaacaatctaagaagcatgtacatgta
agtgagaacggacatacaggaaataaatccggctgccccatctcgaagaaatgtggtgga
tgccagtatattgacaagtcctatgcagagcagttaaaaatcaagaccgatcaggtgaag
aagctgcttgctccatatggttccgtggatgaaattatcggcatgaaagaaccatatcat
tacaggaataaggtcaatgcggcatttcagcataagcgaaatggcgagattctggcgggt
gtatatgaagaaggaacgcaccgggtgctgtcggtggatgattgtaagatcgagaatcgt
ctggcacaggagattgtggagacaatccgagggctgctgcgttcctttaagattaccgtc
tacaatgaagatagtgggtatggattgctgcgccatgtgatgatccggaccggacatgcg
accggagaagttatggttgtgcttgtgacggcatcgccgatcttcccatcgaagaagaac
tttgcgaaggcacttgtcaaggcgcatccgcagatcacgacgatcgtgcagaatatcaat
gacaaggatacgagcatggtgcttggcgagcgcaatcaggtgttgtacggcagaggattt
atcgaggataagctgtgtgggaagaccttcaagatctcgccgacaagtttctatcaggtg
aatccggtgcagactgagctcctgtataacaaggcgatggaatatgcaaaccttaccggc
gaagaggtggtcgtggacgcctactgcggaaccggtacaatcggaatcgtggcaagtgac
catgcgaagcaggtgatcggtgtcgaactgaacaaggcagccgcgaaggatgccatcacg
aacgtgaaacgaaacgaatgtaagaatgtccggatctatgatggcgatgccgggaaattc
atggttggcatggcagaagccggaacggatgtggatgttgtatttttggatccgccgcgc
agtggcagcacaccggagttctttgattccgtctgtaagctggcaccgaagcggatcgtg
tatatctcctgcggaccggaaagtctggcgcgggatctgaaatacctgaagagcaagcgg
atgtatcaggtggagaagatcgcgcttgtggatttatttccgtggacggaacattgtgag
acggtagtcctcttgtcccaacggaaagcggatgattatgttgaggtggaattggaactg
gatgagcttgatgtgacgagtgcagagagtaaggcgacttatgcggagattaaggattat
gtattaaaggagcatgggttgaaggtttctaacctgtatatttcacaggtaaaaagaaag
tgtggaatagaggttggagagaattataacttgccgaaatcggaagatagcagacagcca
cagtgcccggaagagaaggaaaaggcgattaaggatgcgctggagcattttgggatgatt
tag
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