Weissella ceti WS74: WS74_0415
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Entry
WS74_0415 CDS
T03280
Name
(GenBank) RnjB protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wct
Weissella ceti WS74
Pathway
wct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WS74_0415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wct03019
]
WS74_0415
Messenger RNA biogenesis [BR:
wct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WS74_0415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
P8
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AIM62667
UniProt:
A0A075TZP6
LinkDB
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Position
478744..480714
Genome browser
AA seq
656 aa
AA seq
DB search
MSTTLNIMPFGGVRENGKNMYAVTVNEDIFILDAGLKYPESDLLGVDVVIPDFEYLVEHA
DQVRGIFLSHGHADAIGALPYLLSKMQAPVFGSELTLELAKLAVEAEPLAKGFDDYHVVN
ENSEVAMDSVTVSFFKTTHTIPESLGINLETEEGQVVYTGDFKFDTTATPTYQTDLARLA
EIGNKGVIALLADAAGTANTSATDHETDLGKYVLESFRAHAKERIIVATVASNILRIQQV
IDAAFKTGRRIVLSGNDIEKVVRTALRLNKLELPMRENELFVSMKNMDKLAPEETVILET
GRMGEPVRHLQRMAQGEDRNVQIQEGDFVFIATTPAVAMEGFVARTRDVLFRAGASVQQI
STDKKSSGHASRDDFQLLLNLLKPQNVIPVQGEYRVLNSAAKAAYAVGYTPDHVFLLENG
DRLNYADGEMELGGSVQVTSTMIDGSGVGDIGSIVLNDRRILSEDGVFIAVVTIDRKKKK
VVAKPKLDSRGFVYVKTSRDLIREASDLVENTVTEGIQNTKEFDWSNLKNSVRDVLGKFL
YEQTHRKPVILPVIMEANQNGRRRKKTPAKNGNNNANANKKANNAEGGQANKQGNKKQNN
NNKKKQAPKANANKPAEQNRPGNKPEGAAPKKRRRQRKPKAAAQTPATEAQAPKAE
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgacattaaatattatgccgtttggtggcgtccgtgaaaacggaaagaacatg
tacgcagtaacagttaacgaagatatttttatcttggatgcaggattgaagtacccagaa
agcgatttgttgggtgtggatgttgttattcctgattttgaatatctagtagaacatgca
gaccaagttcgtgggattttcttgtcacacggacatgctgatgcaattggggctttgcca
tacttgttgagcaagatgcaagcacctgtctttggatcagaattaacattggaattagct
aagttggccgttgaagcagaacctttagctaagggatttgatgattatcacgttgttaat
gaaaatagtgaagttgcgatggattctgtcacagtttcattctttaagacaactcacaca
attccagaatcactaggaattaacttggaaacagaagaaggacaagttgtttatactggt
gacttcaaatttgatacaacagcaacaccaacttaccaaacagatttggcacgtttagct
gaaattggtaataagggagttattgcattgttggctgatgctgcgggaacagcgaacaca
agtgcaactgaccacgaaactgatttgggaaagtatgttctagaatcattccgtgcacat
gcaaaggaacgtattattgtggcaactgttgcctcaaatatcctacgtattcaacaagta
atcgatgctgcctttaaaacaggacgtcgtattgtcttgtctgggaatgatattgaaaag
gttgtccgtacagcgctacgtttgaacaaattggaattaccaatgcgtgaaaacgaattg
ttcgtatcaatgaaaaacatggacaagctagcaccagaagaaacagttatcttggaaaca
ggtcgcatgggtgaacctgtccgccatctacaacgtatggcacaaggtgaagaccgcaat
gtgcaaattcaagaaggtgacttcgtctttatcgcaacaacacctgctgttgcaatggaa
ggatttgtcgcacgtacacgtgacgtattgttccgtgcaggagcgtctgtgcaacaaatt
agtacagataagaagtcttcaggacatgctagtcgtgatgacttccaactactattaaac
ttgttgaagccacaaaacgtgattccagtacaaggtgaataccgtgtcttgaattcagcg
gctaaggctgcgtatgcagttggttacacacctgaccatgtctttttgcttgagaacggt
gaccgtttgaactatgcagatggtgaaatggaattgggtggatcagtacaagtgacatca
acaatgattgatggatctggtgttggtgatattgggtcaatcgttttgaatgaccgtcgt
atcttgtccgaagacggtgtgtttattgctgttgtgaccatcgatcgtaagaagaagaag
gttgtggcaaagcctaagttggattcacgtggattcgtgtatgtgaagacatctcgtgat
ttgattcgtgaagcaagtgacttagtagaaaacacagttactgaaggtattcaaaacaca
aaggaattcgattggtcaaacttgaagaattctgtacgtgatgtattaggtaagttcttg
tacgaacaaacacaccgtaagccagttattttgccagttattatggaagccaaccaaaat
ggtcgtcgtcgtaagaagacaccagctaagaatggtaacaataacgctaacgcaaataag
aaggctaacaatgctgaaggtggtcaagcgaataagcaaggcaacaagaagcaaaacaac
aataataagaagaaacaagcaccaaaggcgaatgcaaataagccagcggaacaaaatcgc
ccaggtaacaaacctgaaggggcagcgccaaagaagcgtcgtcgtcaacgcaagccaaag
gctgcggcacagacgccagcaactgaagcacaagcaccaaaggcagaataa
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