Weissella diestrammenae: H9L19_00905
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Entry
H9L19_00905 CDS
T06876
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
wdi
Weissella diestrammenae
Brite
KEGG Orthology (KO) [BR:
wdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wdi03016
]
H9L19_00905 (truB)
Enzymes [BR:
wdi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H9L19_00905 (truB)
Transfer RNA biogenesis [BR:
wdi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H9L19_00905 (truB)
Prokaryotic type
H9L19_00905 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QNN75497
UniProt:
A0A7G9T5X2
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All DBs
Position
complement(187213..188121)
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AA seq
302 aa
AA seq
DB search
MDGILAVHKPSGMTSHDVVFKLRKILQMKKIGHAGTLDPSVDGVLPIALGKATKAIEFLQ
ATGKTYVGEVTLGFATETEDLDGAEVARQAIIKPFTRQQIEAKMAELTGNITQIPPMYSA
VKVNGRRLYHYARAGETVDRPERQAIIYRFELLDEPRYDAINQLQKFKFVAEVSKGTYIR
TLAVDLGMKLGVPAVMSQLTRTVAGGFSLANAHTLEEIKARAAEGLGDWLRPIDEALGDL
PRYELTQAQWQWVRDGKGLPAEAIPFTAPRIVYTYSGEVKSIVDWHADKQLYRPYRTFTI
FD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggacgggattttagcagttcacaaaccgagtggtatgacatcacatgatgtggtattt
aaattacgcaaaatattgcaaatgaaaaaaattgggcatgccggaacgctggatccttct
gttgatggtgtcttaccaattgcattgggtaaagcaacaaaggcaattgagtttttacaa
gcgactggtaaaacgtatgttggtgaggtaacgttaggctttgcgactgagaccgaggat
cttgatggtgcagaggtggccagacaagcgattatcaagccgtttacgcgacagcaaatt
gaagccaaaatggcagaattaactggtaatattacccaaattccaccaatgtattcagca
gtgaaggttaatggtcgacgattatatcactatgcacgagccggagaaactgttgaccga
ccagagcgtcaagcgataatttaccgctttgaattattagatgagccacgatacgatgca
attaatcaactacaaaaatttaaatttgtcgcagaagtatcgaagggaacttatatccga
acattagcggttgatttagggatgaaacttggtgttccagcagtgatgagtcagttgact
cggaccgtagctggtgggttttcattagcaaatgcgcatactttagaagaaatcaaagca
cgcgctgcggaaggattaggtgactggttacgaccaattgatgaagctttaggtgattta
ccaaggtatgaattgacgcaggcacaatggcaatgggtacgcgacggtaagggcttgcct
gcggaagcaattccatttacggcaccacggattgtatatacgtattccggtgaagttaaa
tccattgttgattggcacgcggataagcaactgtaccgaccataccgaacttttacaatt
tttgactga
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