KEGG   Weissella diestrammenae: H9L19_01070
Entry
H9L19_01070       CDS       T06876                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
wdi  Weissella diestrammenae
Pathway
wdi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:wdi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9L19_01070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:wdi03019]
    H9L19_01070
Messenger RNA biogenesis [BR:wdi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H9L19_01070
SSDB
Motif
Pfam: RNase_J_C RNase_J_b_CASP Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QNN75523
UniProt: A0A7G9T5Z8
LinkDB
Position
complement(217808..219646)
AA seq 612 aa
MSTNLTVMPFGGMRENGKNMYAVTVGEDIFILDAGLQYPESDLLGVDVVIPDFQYLVDHA
DKVAGIFLTHGHADAIGALPYLLSELSAPIFGSELTIELAKLAIDAEPRTKGFDDYHVVR
GDQEIDFGAVKISFFETTHSIPESLGIVVETPQGSVVYTGDFKFDTTAAPYYRTDMLRLA
EIGRKGVKALLIDAAGTANYGQAAHESEIADYIYDGFRHHKGRIVVAAVASNIQRIQQVI
SAAYRTHRKIILSGNDLEKVVRTALRLGKLHLPVSENELFVSLKNIKTLAPEETVILETG
KMGEPIRHLQRMAHGDDRHIQITTGDLVFITTTPSTAMEGYVARTRDMLFRAGATVKQIS
TDLKSSGHASKNDFQLMLNLLQPENVIPVQGEYRMLNAGLHAAEEVGYTAEHVFILQNGD
RLHLTDKAAELSGSIQVNSTMIDGSGVGDIGSIVLNDRRILSEDGVFIAVVTIDRKKKKV
IAAPKIDSRGFVYVKTSKDLLHEAAELVQTTVADGIKNTKEFDWGKLKGSVRDALGKFLY
EKTRRKPVILPVIMEANQNGRRRKTNLKHAAKSAGNKATNNKKTTNGNQSQNDKSMPHVA
QTTNQKQVQHKA
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgagcacaaatttaacagtgatgccgtttggtggtatgcgtgaaaatggaaagaacatg
tatgctgttacggttggagaagatatttttattttggatgccgggttacagtatccagaa
agtgatttacttggggttgacgtcgttatccctgattttcaatatttggttgaccatgct
gataaagtggcaggtatttttttgacccatggtcacgccgatgcaattggggctttgcca
tatttattaagtgagctttcggcgccaatttttggatctgaattaacgattgaattagct
aaattggcgattgatgcagaaccaagaaccaaagggtttgatgattatcatgttgtccgt
ggggatcaagaaattgattttggcgcggtaaagatttcattctttgaaacgacacacagc
attccagaatcattagggattgttgttgaaacaccacaagggtcagtcgtatatactggc
gattttaaatttgacacaaccgctgcgccatattatcgaacggatatgctccgcttagcc
gaaatagggcgtaaaggggtcaaagcgctactaattgatgcggcaggtacggctaattat
ggacaagcggcacatgagtcagaaattgcagattatatttatgatggctttaggcatcat
aagggacgtatcgttgtcgccgcagtggcatctaatatacaacggatccagcaagtgatt
tcggcagcctatcggacacaccgaaaaattatcttgtcaggtaacgatctggaaaaggtt
gttcgaacagcattgcgcttaggtaaattacatttaccggtatcagaaaacgagttattc
gtatcactaaagaatattaaaacactcgctccagaagaaacagtgattttagagactggt
aagatgggggagcctatccgtcatctacaacgcatggcgcatggtgatgatcgacatatc
caaattacaactggcgatttagtattcatcacaaccaccccctcaacagcaatggaaggg
tatgtggcacgtactcgtgatatgttgttccgcgcgggtgcaacggttaagcaaatttcg
actgatttgaaatcatcaggtcatgcttcaaaaaatgattttcaattgatgttgaatttg
ttgcaacctgaaaatgtaattccagttcaaggcgaatatcgcatgttaaatgctggatta
catgcggcagaagaagtcggatatacggctgaacatgtctttattttgcaaaatggcgac
cggttacatttgacggataaagccgctgaattatcaggctcaattcaagtgaattcaacg
atgattgacggctctggtgtcggagacattgggtcaattgtgttaaacgatcgacgaata
ctatcagaagatggtgtctttattgcagttgtgacgattgatcgaaagaaaaagaaagtc
attgctgcaccaaaaattgattcacgtggctttgtgtatgttaaaacctcaaaagattta
ttgcatgaggcagctgagttagtgcaaacaacagttgcagatgggattaaaaatactaag
gaatttgattggggcaagttaaaaggttccgtccgagatgcattaggtaagtttttgtat
gaaaagacgcgtcgcaagccagtcattttaccagttatcatggaagctaaccagaatggt
cgtcgtcgaaagactaacttaaagcacgctgctaagtcagcgggcaataaggcgacaaat
aataaaaaaacaacaaatggtaatcaaagccaaaatgataaaagtatgccacacgtagcg
caaacaacaaaccaaaaacaagtgcaacataaagcataa

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