Weissella diestrammenae: H9L19_01070
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Entry
H9L19_01070 CDS
T06876
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wdi
Weissella diestrammenae
Pathway
wdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L19_01070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wdi03019
]
H9L19_01070
Messenger RNA biogenesis [BR:
wdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9L19_01070
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QNN75523
UniProt:
A0A7G9T5Z8
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Position
complement(217808..219646)
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AA seq
612 aa
AA seq
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MSTNLTVMPFGGMRENGKNMYAVTVGEDIFILDAGLQYPESDLLGVDVVIPDFQYLVDHA
DKVAGIFLTHGHADAIGALPYLLSELSAPIFGSELTIELAKLAIDAEPRTKGFDDYHVVR
GDQEIDFGAVKISFFETTHSIPESLGIVVETPQGSVVYTGDFKFDTTAAPYYRTDMLRLA
EIGRKGVKALLIDAAGTANYGQAAHESEIADYIYDGFRHHKGRIVVAAVASNIQRIQQVI
SAAYRTHRKIILSGNDLEKVVRTALRLGKLHLPVSENELFVSLKNIKTLAPEETVILETG
KMGEPIRHLQRMAHGDDRHIQITTGDLVFITTTPSTAMEGYVARTRDMLFRAGATVKQIS
TDLKSSGHASKNDFQLMLNLLQPENVIPVQGEYRMLNAGLHAAEEVGYTAEHVFILQNGD
RLHLTDKAAELSGSIQVNSTMIDGSGVGDIGSIVLNDRRILSEDGVFIAVVTIDRKKKKV
IAAPKIDSRGFVYVKTSKDLLHEAAELVQTTVADGIKNTKEFDWGKLKGSVRDALGKFLY
EKTRRKPVILPVIMEANQNGRRRKTNLKHAAKSAGNKATNNKKTTNGNQSQNDKSMPHVA
QTTNQKQVQHKA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaatttaacagtgatgccgtttggtggtatgcgtgaaaatggaaagaacatg
tatgctgttacggttggagaagatatttttattttggatgccgggttacagtatccagaa
agtgatttacttggggttgacgtcgttatccctgattttcaatatttggttgaccatgct
gataaagtggcaggtatttttttgacccatggtcacgccgatgcaattggggctttgcca
tatttattaagtgagctttcggcgccaatttttggatctgaattaacgattgaattagct
aaattggcgattgatgcagaaccaagaaccaaagggtttgatgattatcatgttgtccgt
ggggatcaagaaattgattttggcgcggtaaagatttcattctttgaaacgacacacagc
attccagaatcattagggattgttgttgaaacaccacaagggtcagtcgtatatactggc
gattttaaatttgacacaaccgctgcgccatattatcgaacggatatgctccgcttagcc
gaaatagggcgtaaaggggtcaaagcgctactaattgatgcggcaggtacggctaattat
ggacaagcggcacatgagtcagaaattgcagattatatttatgatggctttaggcatcat
aagggacgtatcgttgtcgccgcagtggcatctaatatacaacggatccagcaagtgatt
tcggcagcctatcggacacaccgaaaaattatcttgtcaggtaacgatctggaaaaggtt
gttcgaacagcattgcgcttaggtaaattacatttaccggtatcagaaaacgagttattc
gtatcactaaagaatattaaaacactcgctccagaagaaacagtgattttagagactggt
aagatgggggagcctatccgtcatctacaacgcatggcgcatggtgatgatcgacatatc
caaattacaactggcgatttagtattcatcacaaccaccccctcaacagcaatggaaggg
tatgtggcacgtactcgtgatatgttgttccgcgcgggtgcaacggttaagcaaatttcg
actgatttgaaatcatcaggtcatgcttcaaaaaatgattttcaattgatgttgaatttg
ttgcaacctgaaaatgtaattccagttcaaggcgaatatcgcatgttaaatgctggatta
catgcggcagaagaagtcggatatacggctgaacatgtctttattttgcaaaatggcgac
cggttacatttgacggataaagccgctgaattatcaggctcaattcaagtgaattcaacg
atgattgacggctctggtgtcggagacattgggtcaattgtgttaaacgatcgacgaata
ctatcagaagatggtgtctttattgcagttgtgacgattgatcgaaagaaaaagaaagtc
attgctgcaccaaaaattgattcacgtggctttgtgtatgttaaaacctcaaaagattta
ttgcatgaggcagctgagttagtgcaaacaacagttgcagatgggattaaaaatactaag
gaatttgattggggcaagttaaaaggttccgtccgagatgcattaggtaagtttttgtat
gaaaagacgcgtcgcaagccagtcattttaccagttatcatggaagctaaccagaatggt
cgtcgtcgaaagactaacttaaagcacgctgctaagtcagcgggcaataaggcgacaaat
aataaaaaaacaacaaatggtaatcaaagccaaaatgataaaagtatgccacacgtagcg
caaacaacaaaccaaaaacaagtgcaacataaagcataa
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