Weissella diestrammenae: H9L19_02465
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Entry
H9L19_02465 CDS
T06876
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
wdi
Weissella diestrammenae
Pathway
wdi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L19_02465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wdi03019
]
H9L19_02465
03009 Ribosome biogenesis [BR:
wdi03009
]
H9L19_02465
Enzymes [BR:
wdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L19_02465
Messenger RNA biogenesis [BR:
wdi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L19_02465
Ribosome biogenesis [BR:
wdi03009
]
Prokaryotic type
rRNA helicases
H9L19_02465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
CMS1
Helicase_RecD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QNN76062
UniProt:
A0A7G9T7I7
LinkDB
All DBs
Position
complement(487869..489443)
Genome browser
AA seq
524 aa
AA seq
DB search
MLKFSELGLTKDLLTAIEKHGYVEATPIQEKTIPLTLAGKDVIGQAQTGTGKTAAFGLPI
LEMIDDSKAVQALVVSPTRELAIQTQEELFKLGRDKRVRVQAVFGGADIRRQIDSLKRGV
NIVVGTPGRLIDHIRRGTIDLSHVKTLVLDEADEMLNMGFLEDIESILKAVPDERQTLLF
SATMPAAIKRIGVQFMTNPEHIQIEAKELTTDLVDQYYVRVREPEKFDTLTRILAVQEPE
LAILFGRTKRRVDELTRGLELRGFKAAGIHGDLTQQKRSQVLKAFKAGEIKILVATDVAA
RGLDVSGVTHVYNFDIPQESESYVHRIGRTGRAGAHGTSVTFVTNSELDYLKDIEKLTKK
RMLALKPFTREEAIAARMRTAVASVDDTVKAIDKALVADQVAELVEKYDAETLAAAVLAA
SANVAEMDADFTLTRERPLPNKKYGRGGSRNGGGYRGHRDGGSRNGGGYRGGHRDGGSRG
GRRDNDSERRKSYDRGARTGSGDRSQRGSRPSGRRQFVIRDNKD
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
attttgaagttttcagaattaggtctcacaaaagacctactaacagccattgaaaagcat
ggctatgtcgaagcaacgccaattcaggaaaagacaattccgttgacgttggcaggtaaa
gatgtcattggacaagcgcaaacagggacaggaaaaacagctgcctttggcctaccaatt
ctagaaatgattgatgatagcaaggcagtgcaagcattggttgtatcaccaactcgtgaa
ctagcaattcagacacaagaagaattatttaaattggggcgtgacaagcgtgttcgggtg
caagccgtgttcggtggtgctgatatccgacgccaaatcgacagtttgaagcgcggtgtg
aacattgtcgttgggacacctggtcgattgattgatcatattcgtcgtggcacaatcgat
ttgtcacatgttaaaacattagttttggatgaagctgacgaaatgttgaacatgggattt
ttggaagatattgagtcaatcttgaaagctgttcctgacgaacgtcaaacattgttgttc
tcagcaacaatgccggcagcaatcaagcgcattggtgttcaattcatgacgaatcctgaa
catatccaaattgaagcaaaagaattgacaactgacctagttgatcaatattatgttcga
gtacgcgaaccagagaaattcgatacattgacacggattttagcggttcaagaaccagaa
ttggccatcttatttggtcgtacaaagcgtcgtgttgatgaattaacacgtggtcttgaa
ttacgtggctttaaggctgctggtattcatggcgacttaacgcaacaaaagcgctcacaa
gtgttgaaggcgtttaaagctggagaaattaaaatcttagttgctacagatgttgctgcg
cgtgggttggatgtttcaggtgtgacgcacgtttataattttgatatcccacaagaatca
gaatcatatgttcaccgaattgggcgaacaggtcgtgctggtgcacatggtacgtccgtc
acttttgttaccaattctgaattagattatctaaaagatatcgaaaagctaactaagaag
cggatgcttgccttaaagccatttacgcgtgaagaggctattgctgctcgcatgcgcaca
gcagtagcgtctgttgatgacactgttaaggcgattgataaagcactcgttgctgatcaa
gtggccgaattggttgagaagtatgatgcggagaccctagcagctgctgtattagcagct
tcagcaaatgtagctgaaatggatgctgacttcacattgacacgggaacgtccattgcca
aataagaagtacggtcgcggtggttcacgtaatggtggtggttatcgtggtcatcgtgat
ggtggttcacgtaacggtggtggttaccgtggtggtcatcgtgatggtggttcacgtggt
ggacgccgagataatgattctgagcgtcgtaagtcatatgaccgtggtgcaagaactggt
tcaggtgatcgatcacaacgtggttcacgaccatcaggtcgacgtcaatttgttattcgt
gataataaagactaa
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