Wolbachia endosymbiont of Drosophila mauritiana: EJB00_02220
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Entry
EJB00_02220 CDS
T07604
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
wdm
Wolbachia endosymbiont of Drosophila mauritiana
Pathway
wdm03420
Nucleotide excision repair
wdm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
wdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJB00_02220
03430 Mismatch repair
EJB00_02220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wdm03400
]
EJB00_02220
Enzymes [BR:
wdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EJB00_02220
DNA repair and recombination proteins [BR:
wdm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJB00_02220
MMR (mismatch excision repair)
Other MMR factors
EJB00_02220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
AAA_12
C2_SHIP1-2_first
ResIII
Motif
Other DBs
NCBI-ProteinID:
QCB63504
LinkDB
All DBs
Position
415875..417791
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AA seq
638 aa
AA seq
DB search
MNDYLSLLNPEQQLAVTNVNGPVLILAGAGTGKTRTITSRIAHIIRNGYAYSDEILAVTF
TNKAANEMVSRVLELTGTNIPWLGTFHAIAAKILRHHAEIVGLNCNFTIIGVDDQLQVIK
NIINEISPDYLSEKCKTIMNIIQQWKEKCLLPSEVEDVQSFRPVYVTALKVYYQYQERLK
FLNSVDFGDLLLYNIQLFNKKTEVLSYYQNKFKYVMVDEYQDTNAIQYLWLKYLAKEHSN
ICCVGDDDQSIYSWRGAEVENILKFSDDFKNAKTFKLECNYRSTSHILATASYVINHNKT
RLEKKLWTTNVEGEKVNLIKLWDGKAEARFISEQILKLNKYRFSDIAVLVRATFQTRVLE
EYFIKYSIPYKIISGVKFYERQEVRDIIAYLRFVTNNNDDLAFERIVNRPKRSIGATTLK
KIYTTAQDNKISFFEAAKILVNSDQVTERIKLSLNDFLNKIKAWEEIVSVKPLHEFVKIV
ANQSGYIEMLENEEVTGLVRIENVKELISSLKNFDNATTFLEHISLVMEVDNMNNDDTVY
VMTLHAAKGLEFPCVFLPGWEEGLFPHQRSFEDKSGKALEEERRLAYVGITRAKERLIIS
CADRREMNNQWQPMYTSRFIKELPRENVEVIKSNIAYC
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattatctctcactgctaaatccagagcaacaattagctgtaactaacgtgaat
ggaccagttttgatactagcaggagccggaacaggaaaaacaagaacgatcacttcaagg
atagcgcacataattcgaaatggctatgcttactctgatgagatcttagcagttacattt
acaaataaagcagcaaatgagatggtatcaagagtgcttgagctaacgggtacaaacata
ccatggcttggcactttccatgcaattgcagcgaaaattttacgtcatcatgctgaaatt
gtaggcttaaattgcaattttacaattattggtgtggatgatcaattacaggtaataaaa
aatattattaatgaaataagccctgattacctatcagaaaaatgtaagaccattatgaat
atcatccagcagtggaaagagaagtgtttattgccgtctgaagtggaagatgttcaatca
tttaggccagtttacgtaactgcactcaaagtctattaccagtatcaggaaaggttaaaa
ttccttaactctgtcgattttggtgacttattgttatataacatacaactttttaataaa
aagactgaggttctatcttactaccaaaacaagtttaagtatgtcatggtagatgagtat
caagatacaaatgcaatacaatatctttggctaaaataccttgcaaaagagcattcaaat
atttgctgtgtaggagatgatgaccagtcgatatacagttggcgtggtgcagaagttgaa
aatattttgaaattttccgatgattttaaaaatgcaaaaacctttaaactggagtgtaac
tacaggtcaacatcccacatacttgcaactgcgtcatatgttatcaatcacaataagact
cgcttagaaaaaaaattgtggacaacaaacgttgaaggggaaaaggtaaatctaataaaa
ttatgggacggaaaagctgaagcaaggttcataagcgaacagatattaaagctcaataaa
tacagatttagtgacattgcagtgctggtaagggcgacttttcagactagagttctggaa
gagtattttataaaatattcaattccctacaagattataagtggtgtaaaattctacgaa
cgtcaggaagtcagggatataattgcatatttaagattcgttacaaacaataacgatgac
ttagctttcgaaaggatcgtaaatcggccaaaaagaagcataggagctacaactctaaag
aaaatatacacgactgctcaggataacaaaatttctttttttgaggcagcaaaaatattg
gttaatagtgatcaagtaaccgaaagaattaaactctcactaaatgattttttaaataaa
attaaagcttgggaagaaatagtaagtgtaaaaccactgcatgaattcgttaaaatcgta
gcaaaccaatcagggtatattgaaatgcttgaaaatgaggaggtaacaggcttagtacga
atagaaaatgtcaaggagctcatctcatctttaaaaaatttcgataatgccacaactttc
ttggagcatataagtctagtgatggaagtggataatatgaataacgatgacaccgtatat
gttatgactcttcatgcagccaaaggacttgaattcccgtgcgtgtttctacctggttgg
gaagagggattatttcctcatcaaagatcttttgaagataaaagtggtaaagctttagaa
gaagaaaggagacttgcatatgttggcataaccagggcaaaggaaaggttaatcatttca
tgtgcagacagaagggaaatgaataaccaatggcaaccaatgtacacttctcgattcatc
aaagagttgccaagggaaaatgttgaggtcattaagagtaacattgcttactgctga
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