Wolbachia endosymbiont of Drosophila mauritiana: EJB00_04070
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Entry
EJB00_04070 CDS
T07604
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wdm
Wolbachia endosymbiont of Drosophila mauritiana
Pathway
wdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJB00_04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wdm03019
]
EJB00_04070
03009 Ribosome biogenesis [BR:
wdm03009
]
EJB00_04070
Enzymes [BR:
wdm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
EJB00_04070
Messenger RNA biogenesis [BR:
wdm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EJB00_04070
Ribosome biogenesis [BR:
wdm03009
]
Prokaryotic type
rRNA processing factors
EJB00_04070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QCB63802
LinkDB
All DBs
Position
complement(836697..838454)
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AA seq
585 aa
AA seq
DB search
MASDGKRLLLIESTTCSNEVRVALLVNDRVVEFEQEFKEKRQLRGNIYVAYIKRIEPALQ
AVFIEYGKNKQGFLSFSEISLNYFNIPEKEKEIFPDEGYSSGVDCSNDNCTEEGLDSTAS
NESSSGFVREVPLHRKYKLQDVISVNQKLLVQLTKEERGNKGASFTTYVTLVGRYCVFMP
NSISRGGVSRRIEDTNVRKQLKDILDSINLPKSSGLIVRTVGAGKSKKEIEQDYNNLTLL
WQNIQQNFSSLNVPSLIYNEADVVMRSVRDFCSNDTEIIVSDREVCEAVRKYTKNVLQGK
LRPRLYRGSVPIFTYYRVEDQISELYSNRVELPSGGSLVITLTEAFVSIDVNSGKMTGED
NIEETAYRTNMEALSEISRQANLRGLSGLIVVDFIDMLKLEYCKNVEFAIKQAFKDDRAK
VQFSFINDFGLMVFSRQRIKPNIQEINTTECLRCKGIGRVKSNEVVVASILRDLQHIANK
NQNKSFDLIARSAVIAHIFNNKRDMVSTIEKEFNITLNVSIDNSLDADTFILKQGDHVNF
NDYKPLQNCGCQIVNSRDKEAGSSDKLPGNFWLTKWLSRLLSSNN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgatggcaaaaggttattgttgatagaaagtactacctgttctaacgaggta
agggttgccctactagttaatgatagggttgtagagtttgaacaagaattcaaggaaaaa
agacaattaagaggtaatatatacgttgcttatataaagcgtatagagcctgctttgcag
gccgtgttcattgagtatggaaaaaataagcaaggttttttgtctttttctgagatatct
ctaaattactttaatattccagaaaaagagaaggaaattttccctgacgaaggctattcg
agtggtgtggactgttcaaatgataattgcacagaagaaggcctagattctacagctagt
aatgaatccagcagtggttttgtgagggaggtacctttacatagaaaatataagttacaa
gatgtgatttcagtaaatcaaaagttattggttcaattaactaaagaagaacgaggaaat
aaaggagcttcatttacaacatacgtaactttggtcggtagatactgtgttttcatgccc
aattccataagtaggggtggagtatctcgcagaattgaagataccaacgttagaaaacag
ttaaaggatatattagattcaataaatttaccaaaaagttcaggtttaatagtaagaact
gttggtgcaggaaaaagtaagaaagaaattgagcaagattacaataatttgaccttatta
tggcaaaatatccagcaaaacttctcttctttaaatgttccatcattaatttacaacgaa
gcagatgtagttatgagatctgtacgtgacttttgtagtaatgatacagaaattatagta
tctgatagagaagtttgtgaagcggtaagaaaatacactaaaaatgtgttacaaggaaaa
ttacgtcctaggttatatagaggctctgttccaatctttacttactatcgagtcgaagat
caaatttctgaattatatagcaatagagtagaattaccatctggtgggtctttggtgata
accttaactgaggcatttgtttcaatagacgtaaattcaggaaaaatgacaggagaagat
aacatagaagaaacagcttatagaactaatatggaggcattatctgaaatatcaaggcaa
gcgaatctcaggggcttatcagggttaatagttgttgattttattgacatgttgaaactt
gagtattgcaaaaatgttgaatttgctatcaagcaggcgtttaaagatgatagagctaaa
gttcaatttagctttatcaatgactttggtttaatggtcttttcaagacaaagaattaaa
ccaaatatacaggaaattaatactacagagtgtttgcgctgtaaaggtattggaagagtg
aaatcaaacgaagtggttgttgcatcgatactaagggatttgcaacatattgctaataaa
aatcaaaataagtcctttgatttaatagcacgcagtgcagttatagcgcacatttttaat
aataagcgtgatatggtttctacaatcgaaaaagagttcaatattacattaaatgttagt
attgataatagtttagatgcagatacatttattttaaagcaaggagatcatgttaatttt
aatgattataagccattgcagaattgtggatgtcaaattgtgaatagcagggataaagaa
gctggtagttcagataaactaccgggcaacttttggttaactaaatggctttcgcgcctt
ttgagctctaacaactaa
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