Wolbachia endosymbiont of Brugia pahangi: WBP_0219
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Entry
WBP_0219 CDS
T07614
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
web
Wolbachia endosymbiont of Brugia pahangi
Pathway
web03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
web00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WBP_0219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
web03019
]
WBP_0219
03009 Ribosome biogenesis [BR:
web03009
]
WBP_0219
Enzymes [BR:
web01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
WBP_0219
Messenger RNA biogenesis [BR:
web03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
WBP_0219
Ribosome biogenesis [BR:
web03009
]
Prokaryotic type
rRNA processing factors
WBP_0219
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QIT35936
LinkDB
All DBs
Position
218214..219986
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AA seq
590 aa
AA seq
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MANSGKRLLLIENSICSDEVRVALSADNRVVEFEQEFKEKKQLRGNIYIACVKRVEPSLQ
AVFIEYGKNKQGFLSFSEISPDYFNIPEKEKETFFEGCLNDDCTEESGNASANISSDSLT
NKNVNESGNGFVREVSLYKRYKLQDVISVNQRLLVQLTKEERGNKGASFTTYITLVGRYC
VFMPNSMSKGGVSRRIEDVNVRKQLKDILSSMDLPKRSGLIIRTIGSGKSKKEIEQDYNY
LSSLWQNIQKNASSVNVPSLIYNEADLIMRSIRDFCSNGMEVIVSGKEAFETVRQYARNA
LKGSRLRYRLYRGFIPIFTYYGVEDQISELYSNRVKLPSGGSLIITLTEAFVSIDVNSGK
MTGEDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLRYQYCRAVESAIRQAFR
DDKARVQFSYINDFGLMVFSRQRIKPSIQEINTTECLHCKGIGKVKSNEVIVASILRDLQ
HIASRNRNRSFDLVAHGAIIAHIFNNKRSTVSTIEKEFNIKLNVSADSSLSVDTFVLKRG
DEVNLSDCKPLQNSGYKIESSSNERADNSEKLQGSFWLTKWLSRILNSNS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaatagtggtaagaggttactattaatagaaaattctatctgttctgatgaggta
agagttgctttatcagctgacaatagagttgtggaatttgaacaagaattcaaagaaaaa
aaacaattaagaggtaatatatatattgcttgtgtaaaacgtgtagagccttctttacaa
gctgtgtttattgaatatggaaaaaataagcaaggttttttgtctttttctgaaatatct
ccagattatttcaatattccagaaaaggagaaagaaactttctttgagggttgcctgaat
gatgattgtacagaggaaagtggtaatgcctcagcaaatatttcttcagattccttaact
aataagaatgttaacgaatccggtaatggttttgtaagagaagtgtctttatataagaga
tataagttgcaagatgttatttcagtaaatcaaaggctattagttcaactaactaaggaa
gagcgaggcaacaagggagcttcgtttacaacgtacataactttagtaggaaggtactgt
gtttttatgcctaattccatgagtaaaggtggagtgtcacgcagaattgaagatgttaat
gtcagaaagcagttaaaggatatattaagttcaatggacttgccaaaaaggtcaggtttg
ataataagaaccattggttcagggaaaagtaaaaaggaaattgagcaggattacaattat
ttatcttcattgtggcagaatattcaaaaaaatgcttcctctgtaaatgttccatcattg
atttataatgaagcagacctaattatgaggtctattcgtgatttttgtagcaatggtatg
gaagttatagtatctggaaaggaagcttttgaaacggtaagacaatatgctagaaatgca
ttaaaaggtagtaggttacgttataggttgtatagaggttttattccaatctttacttac
tacggagtcgaagatcaaatttctgagttatacagcaatagggtaaaactgccgtctggt
ggatctttgataataactttaactgaggcgtttgtttcaatagatgtaaattcaggaaag
atgacgggagaggatagtatagaggagacagcttatagaactaatatggaagcagtacct
gaaatatcaagacaggtgaatttaagaggcttgtcgggattaatagtagtagattttatt
gacatgttaaggtatcaatattgtagagctgttgagtctgctattaggcaggcgtttagg
gatgataaagctagagttcaatttagctacataaatgactttggtttaatggtattttca
aggcaaaggattaaaccaagcatacaggaaattaacactacagagtgcttgcactgtaaa
gggattgggaaggtgaagtcaaatgaggtgattgttgcatcaatattgagagacttgcag
cacattgctagtagaaatcgaaataggtcatttgatttggtagctcatggtgcaattata
gcacatatttttaataacaaacgcagcacagtttctacaatcgaaaaagagtttaatatt
aagttgaatgttagtgctgatagcagtttgagtgtagatacgttcgttttaaaacgaggg
gatgaagttaacttaagtgattgtaagccattacaaaactctggttacaaaattgaaagc
agcagtaatgaaagggctgataattcagagaagttacaaggcagtttttggttaactaag
tggctttcacgcattttgaactctaatagctaa
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