Wolbachia endosymbiont of Carposina sasakii: wCauA_02455
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Entry
wCauA_02455 CDS
T07583
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wec
Wolbachia endosymbiont of Carposina sasakii
Pathway
wec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wCauA_02455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wec03019
]
wCauA_02455
Messenger RNA biogenesis [BR:
wec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
wCauA_02455
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QDH18519
LinkDB
All DBs
Position
476177..477811
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AA seq
544 aa
AA seq
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MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGVGFADETMPGVELLIADIDFIA
QRKKDLLGIIITHAHEDHCGAVPHLWEELQCSIYTTKFTVNFLKEKLKEFRLEGIVPVKE
VDINGSINLGPFTVEFINVTHSIPEANSILISTEMGSALHTGDWKFDPKPVVGLTSNMER
LKEIGDKGDLLAAICDSTNILSKHHPESEGEIYNNIYNIIKRSKKLVAVSLFASNVARIE
TISQAAKALNRKVVLLGRSLWRIVKVAQDSGYLTDSPQFLEAKEAVNFPREELVLLCTGC
QGEPLAATARLAAKSHQAFKMQQGDTMIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKT
EHVHASGHPTREELKEMYSLIKPKMSIPVHGEYIHTHAHVKFAKECGVAKAIMIAPGDIV
NLENGEKVDSIDVDYFGIDGMLLRHPESSVIKMRKRMRDAGVIVVTAVVNKKNKLLAKPK
VFVPGVFEVLEDAATIQKIVKKVESLFSLQPTKKIKNKIESSILSILKEYLLKRPIIEVQ
IEQV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaacaaaaatgagtttttatttcttccgcttgggggagtaggaagaatcggg
atgaatgttagcctatatcattaccaaggtaagtggattatgatcgaccttggtgttggt
tttgcagatgaaactatgccaggtgttgagctgctcattgctgatatagattttattgct
caaagaaaaaaagatttacttggaataataattacacatgcacatgaggaccactgcggt
gcagtgccccacttgtgggaagagttgcagtgctccatatatacaacaaagtttacggtt
aattttcttaaagaaaaactaaaagaatttcgattggaaggtatagtgcctgtaaaagag
gtagacataaatggcagcataaatttgggtccttttaccgtcgagtttataaatgtaact
cattcaattcctgaggcaaattcaatattaattagcactgaaatgggtagtgcactccat
accggagactggaaatttgatccaaaacctgttgttggattaacttctaatatggagcgt
ctaaaagaaattggcgataaaggtgacctgcttgcagcaatttgcgattcaaccaatata
ttaagcaagcatcaccctgagtcagaaggtgaaatttataataatatttataacataata
aagcggtctaaaaaattagttgctgtttcgctattcgcttcaaatgtggcacgaattgaa
acgataagccaagctgcaaaagcactaaatagaaaagtagttttacttggtagatcttta
tggagaatagtgaaagttgcgcaagatagtggttatttaactgattctcctcagtttctt
gaagcaaaggaagcagtaaattttccaagggaagaactggtgctactttgcacaggttgt
caaggtgagccactggcagctaccgcaagacttgctgctaagagtcatcaagcatttaaa
atgcagcaaggtgataccatgatcttttcgtcaaaaatcattcctggaaatgaaactcgt
gcgcacaacatgctcaatgcctttattgagatgggggtagaagttattactgaaaaaaca
gagcatgttcatgcttctgggcatccaacaagagaagagctaaaggaaatgtattcttta
ataaaaccgaagatgtctattccagttcacggcgaatatattcacacgcatgcacatgta
aaatttgctaaagagtgcggtgtggcaaaagcaataatgattgcaccaggtgatattgtt
aatttggagaacggagaaaaagttgattcaattgatgttgactactttggtattgatggt
atgctgctacgtcatccggagagcagtgttataaaaatgcgtaaaaggatgagagatgcc
ggagttattgtggtaacagcagttgtaaacaagaaaaataaattgcttgctaaaccaaaa
gtatttgtacctggtgtttttgaagtgctagaagatgcagctaccatacagaaaattgtc
aagaaagttgagtcgttgtttagtttgcagccaacaaaaaaaattaaaaataagattgaa
agttcaatattgagtatcttaaaggaatatttactaaaaaggcctataattgaggttcag
atagaacaggtatga
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