Wolbachia endosymbiont of Carposina sasakii: wCauA_03070
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Entry
wCauA_03070 CDS
T07583
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
wec
Wolbachia endosymbiont of Carposina sasakii
Brite
KEGG Orthology (KO) [BR:
wec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
wCauA_03070 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wec03021
]
wCauA_03070 (rpoD)
Transcription machinery [BR:
wec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
wCauA_03070 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_ner
Sigma70_r1_2
DDE_Tnp_ISL3
DUF1993
Sod_Ni
Motif
Other DBs
NCBI-ProteinID:
QDH19312
LinkDB
All DBs
Position
608318..610270
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AA seq
650 aa
AA seq
DB search
MSTINDAEDKKKIIKDLVTKSIKKGGFITFDDINDKLSDENFSSDFIDDAISLLQDSGIN
VLESSEDEEDIPSNSDDSKLDDDDTSPNVTATLVQNDDPVRIYLQDMSSVKLLSRADEIE
IAKKIESEKHNMLRAIIETSVTLKVIKVWRDDLSNGALLLREIIDLDAIYNSDFNVVPKE
ESEESEESAEDVEDSEDVSEDAEYCSDDEKDSKKSDDEKDGNNEDISSVNLNVSILEMES
DLLPKVIVALDEIITLTNEALILRKNSKNFSNELENLYNQIWSIALQIKLSDAAVARITQ
ELYKINRSITLEEANLIAEARKYDIDRESFYKVYDDVLLKHELKKISLLKINENQSSFTG
ELKNKFLRFIDDNSEHIASTLNGIKQHIQKDNVQEFKELIKRIQKHKREVSEAKQEMIKA
NLRLVVSIAKKYSKRGLDLLDLIQEGNIGLMKAVDKFDYKRGYKFSTYGTWWVRQSITRA
IPEQSKVVRIPVHMVEIISKINRALRKMTHEMGREPTLEELSVELTMPLERIRKVMKIAR
DPVSLEAPTGKDDSSTFGDCIEDKRVSRPEDAAILADLRGITTNVLATLTPKEERILRMR
FGLGKDGKEHTLEEVGKIFNVTRERIRQIEAKALRKLKHPSRARKLRGFF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactattaatgatgcagaagataagaaaaaaattatcaaagatctggtaactaag
agtataaaaaagggtggttttatcacctttgatgatataaatgataaattatcagatgaa
aatttttcgtctgactttatagatgatgctatatctttattgcaggattccggaattaat
gtgcttgaaagtagcgaagatgaagaagatattccttccaacagtgatgatagtaaactt
gatgatgatgacacatcgccaaatgttactgcaactttagtacaaaatgatgatccagtg
aggatttatttacaagacatgagctccgtaaagcttttatcaagggcagatgaaatcgag
atagcaaaaaaaattgaatctgaaaagcataacatgttacgtgcaataattgaaacatca
gtaacattaaaggtgataaaagtatggcgtgatgatttaagtaatggagctctcttactg
agagaaattatagatctggatgcaatttataactctgattttaatgtggtacccaaagaa
gaaagtgaagagagtgaagaaagtgctgaagatgttgaggattctgaggatgtttctgaa
gatgctgagtactgtagtgatgatgagaaagatagtaaaaaaagtgatgatgagaaagac
ggtaataatgaagatataagttcagtcaatttaaatgtttctattcttgaaatggaaagt
gacttattgccaaaggtcatagttgcattggatgagataattactttaacaaatgaagcg
ttgatattaagaaaaaattctaaaaatttctctaatgagctagaaaatttgtataatcaa
atatggtctatagcattacaaattaagttaagtgatgctgctgttgccagaattacacaa
gaactttataagataaatagatccattacgcttgaagaggctaatcttattgctgaggct
agaaaatacgatatcgatagagaaagtttctataaagtttatgatgacgtgcttttaaag
cacgaattgaaaaagataagtcttttaaagatcaatgaaaatcagtcctcttttacaggt
gaattaaaaaacaaatttttaaggtttatagacgataactctgaacatatagctagtacc
ttgaacggtattaagcagcatatacagaaagataacgtacaagaatttaaggagctaatc
aagagaatacaaaaacacaaacgagaagtctctgaagcaaagcaagaaatgattaaggct
aacttaaggctagtagtttccattgctaagaagtattcaaaaagaggccttgatctgctt
gatttgatacaagaaggcaatattggtcttatgaaggccgtagataagtttgattacaaa
cgtggatataaattttcaacttatggcacttggtgggtaagacaatcaatcactagagca
atacctgagcagtctaaagtagttagaataccagttcatatggtggaaattatcagtaaa
atcaacagagcattaagaaagatgactcatgagatgggaagagagccgacgttagaggaa
ttgagtgtagaactgacaatgccactggaaagaatacgcaaagttatgaaaatagcaagg
gatccagtaagtcttgaagctccaacaggaaaagatgatagtagtacctttggtgattgt
atagaagacaagcgagtctccaggccagaggatgctgcaatacttgctgacttgcgtggc
attacaaccaatgttcttgcaactttaacaccaaaggaagaaagaattttaagaatgcgt
tttggccttggcaaagatgggaaggaacataccttagaagaagtaggaaaaatttttaat
gtaacacgtgagagaattaggcaaatagaggcaaaagcactgcgcaagttgaaacatcca
agccgtgctagaaaacttagagggttcttttaa
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