Wolbachia endosymbiont of Carposina sasakii: wCauA_06775
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Entry
wCauA_06775 CDS
T07583
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wec
Wolbachia endosymbiont of Carposina sasakii
Pathway
wec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wCauA_06775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wec03019
]
wCauA_06775
03009 Ribosome biogenesis [BR:
wec03009
]
wCauA_06775
Enzymes [BR:
wec01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
wCauA_06775
Messenger RNA biogenesis [BR:
wec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
wCauA_06775
Ribosome biogenesis [BR:
wec03009
]
Prokaryotic type
rRNA processing factors
wCauA_06775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TdIF1_2nd
Motif
Other DBs
NCBI-ProteinID:
QDH19208
UniProt:
A0A4Y6URF8
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Position
complement(1371484..1373256)
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AA seq
590 aa
AA seq
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MVNSGKRLLLIENSTCSNEVRVALSVNNKVVEFEQEFKEKKQLRGNIYVAYIKRIEPSLQ
AVFIEYGKNKQGFLSFSEISLDYFNIPEKEKETIFESYSNDDYTEKGNDTIANVSSDSAA
SKNVNESGSGFVREVPLYKKYKLQDVISVNQKVLVQLTKEERGNKGASFTTYITLVGRYC
VFMPNSMSKGGVSRRIEDANVRKQLKEILSSINLPKRSGLIVRTVGSGKNKKEIEQDYNY
LSSLWQSIQKNAFSVNVPSLIYNEADVIMRSVRDFCSDGIEVIVSGKEAFEAVRQYANNA
LKGSKLRYRLYRGYAPIFTYYGIEDQISELYSNRVELPSGGSLIITLTEAFVSIDVNSGK
MTGEDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIDMLKYQYCRAVESAIKQAFK
DDKAKVQFSYINDFGLMVFSRQRIKPNIQEINTTECLHCKGTGRVKSNEVIVSSILRDLQ
HIANKNRNKSFDLVAHSAVIAHIFNNKRNTVSTIEKEFNITLNVSIDNSLDVNTFVLKQG
DDVNLNGYKPLQNSGYQIGDSSNEEADNSNKLRGNFWLTKWLSRLLSSNN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaatagtggtaaaaggttattattgatagaaaattccacctgttctaatgaggta
agagttgccttgtcagttaataataaggttgtagaatttgaacaagaattcaaggaaaaa
aaacaattaagaggtaatatatacgttgcttatataaagcgtatagagccttctttgcaa
gccgtatttatcgaatatggaaaaaataagcaaggttttttgtctttttccgagatatct
ctagattacttcaatattccagaaaaagaaaaggaaactatctttgagagctactcaaat
gacgattatacagaaaaagggaacgataccatagcaaatgtctcttcagattctgcagct
agtaagaatgtcaacgagtcaggtagtggttttgtaagagaggtacctttatataaaaaa
tacaaattacaagatgttatttcagtaaatcaaaaagtattggttcagctaactaaagag
gaacgaggcaataaaggagcttcatttacaacatacataactttagtgggtagatactgt
gttttcatgccaaattccatgagtaaaggtggagtgtctcgcagaattgaagatgctaat
gtcagaaagcagttaaaggagatactgagttcaataaacttgccaaaaaggtcaggttta
atagtaagaactgttggttcaggaaaaaataagaaagaaattgagcaggattacaattac
ttatcctcattatggcagagcattcaaaaaaatgccttctctgtaaacgttccatcatta
atttacaatgaagcagatgtaattatgagatctgttcgtgatttttgtagcgatggtata
gaagttatagtgtctggaaaggaagcttttgaggcagttaggcaatatgctaacaatgca
ctaaaaggtagtaagttgcgctatagattgtatagaggttatgctccgatctttacttac
tacggaatcgaagatcaaatttctgagttatatagcaatagagtagaattgccatctggt
gggtctttgataataactttaactgaggcgtttgtttcaatagacgtaaattcaggaaag
atgacaggagaagatagcatagaagaaacagcttatagaaccaacatggaagcagtacct
gaaatatcaagacaggtgaatcttaggggcctatcaggattaatagtagtcgattttatt
gatatgttgaaatatcagtattgcagagctgttgagtctgctataaagcaagcgtttaaa
gatgataaagctaaagttcaatttagctacataaatgactttggtttaatggtattttca
agacaaagaattaaaccaaacatacaagaaattaatactacagagtgtttacactgcaaa
ggtactggaagagtaaaatcaaacgaagtaattgtttcatcaatactaagggatttacaa
catattgctaacaagaatcgaaataagtcttttgatttagtagcacacagtgcagttata
gcgcacatttttaataacaaacgcaatacagtttctacaatcgaaaaagagtttaatatt
acattgaacgttagtattgataacagtttagatgtaaatacatttgttttaaaacaagga
gatgatgttaatttaaacggttataagccattacagaactctggataccaaattggggat
agcagcaatgaagaagctgataattcaaataaactacgaggcaatttttggctgactaag
tggctttcgcgccttttaagttctaataactaa
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