Wolbachia endosymbiont of Drosophila simulans wNo: wNo_08450
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Entry
wNo_08450 CDS
T02641
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
wed
Wolbachia endosymbiont of Drosophila simulans wNo
Pathway
wed03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
wed00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
wNo_08450 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wed03021
]
wNo_08450 (rpoA)
03400 DNA repair and recombination proteins [BR:
wed03400
]
wNo_08450 (rpoA)
Enzymes [BR:
wed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
wNo_08450 (rpoA)
Transcription machinery [BR:
wed03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
wNo_08450 (rpoA)
DNA repair and recombination proteins [BR:
wed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
wNo_08450 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AGJ99238
LinkDB
All DBs
Position
925055..926122
Genome browser
AA seq
355 aa
AA seq
DB search
MYYSDNVSFCGNLDRLTKPNAIKVILGDSSKKSDIVLEPLESGFALTLGHALRRVMLSSL
RGSAVYGIKIEGMNHEFTSIQGVREDITDIALNMGMLRCKLNNTSNKCLNLSAKGPCQVL
AGMIETDDQCSIINKDLVICTLGQDVELNITIYVASGKGYLSVNKYKENEFLKSMNEQDL
IGFIPVNALYSPVERVSYKVENSRVGQVTDKDKLILSIETDGTISPSQAIDYAARILQEQ
FQPFINSDMSYKKSQVSLSSGAKDLGYDPVLLCKVDEMELSVRSHNCLKNENITYIGDLV
QKTEVEMLRTANFGRKSLNEIKAILNNSGLSLGMNIPNWPPKDIDELAKQHTDED
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtattatagtgataatgtttctttctgtggaaatttagatagattaactaagcctaat
gcaattaaggtaatattaggtgattcgagtaaaaaaagtgatatagttctagaacctttg
gaaagtggttttgctttaacgttgggtcatgcattaaggcgtgtaatgttgtcttctctt
cgcggtagtgctgtttatggaataaaaattgaaggcatgaatcatgaatttacttcgatc
caaggagttagggaagacataactgatatagcattaaatatgggcatgttgagatgtaag
ttaaataatacgtctaataagtgcttaaatttgagcgctaaagggccttgtcaagtatta
gctggaatgatagaaactgatgaccaatgctctattattaataaagatttggtgatatgt
acactaggtcaagatgtggagcttaacattactatatatgttgctagtggaaaaggttat
ctttctgtaaataaatataaagaaaatgaatttttaaaatctatgaatgaacaagattta
attggttttattccagttaatgctttatatagtcctgttgagagggtttcatataaagta
gagaatagtcgtgttggtcaagttactgataaagataagctgatattgtcaattgaaact
gatggtacaatctctccaagtcaagctattgactatgctgcaagaatattacaagagcaa
tttcagccttttattaattctgatatgagttataaaaaatcgcaggtttctttgtctagt
ggtgctaaagatttgggctatgatcctgttctattgtgtaaagtagatgaaatggaatta
tctgttagatctcataactgtctgaaaaatgaaaatatcacttatataggtgatcttgtg
caaaagacggaagttgaaatgttaagaactgctaattttggccgaaaatctttgaatgaa
atcaaggcaattttaaataattcaggtttgtctttgggtatgaatataccaaattggccg
cctaaggatatagatgaactggctaaacaacatactgatgaggattag
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