Wolbachia endosymbiont of Drosophila simulans wNo: wNo_09330
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Entry
wNo_09330 CDS
T02641
Name
(GenBank) Ribonuclease, Rne/Rng family protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wed
Wolbachia endosymbiont of Drosophila simulans wNo
Pathway
wed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
wNo_09330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wed03019
]
wNo_09330
03009 Ribosome biogenesis [BR:
wed03009
]
wNo_09330
Enzymes [BR:
wed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
wNo_09330
Messenger RNA biogenesis [BR:
wed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
wNo_09330
Ribosome biogenesis [BR:
wed03009
]
Prokaryotic type
rRNA processing factors
wNo_09330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AGJ99312
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All DBs
Position
1015036..1016793
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AA seq
585 aa
AA seq
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MASDGKRLLLIESTTCSNEVRVALLVNDRVVEFEQEFKEKRQLRGNIYVAYIKRIEPALQ
AVFIEYGKNKQGFLSFSEISLNYFNIPEKEKEIFPDEGYSSGVDCSNDNCTEEGLDSTAS
NESSSGFVREVPLHRKYKLQDVISVNQKLLVQLTKEERGNKGASFTTYVTLVGRYCVFMP
NSISRGGVSRRIEDTNVRKQLKDILDSINLPKSSGLIVRTVGAGKSKKEIEQDYNNLTLL
WQNIQQNFSSLNVPSLIYNEADVVMRSVRDFCSNDTEIIVSDREVCEAVRKYTKNVLQGK
LRPRLYRGSVPIFTYYRVEDQISELYSNRVELPSGGSLVITLTEAFVSIDVNSGKMTGED
NIEETAYRTNMEALSEISRQANLRGLSGLIVVDFIDMLKLEYCKNVEFAIKQAFKDDRAK
VQFSFINDFGLMVFSRQRIKPNIQEINTTECLRCKGIGRVKSNEVVVASILRDLQHIANK
NQNKSFDLIARSAVIAHIFNNKRDMVSTIEKEFNITLNVSIDNSLDADTFILKQGDHVNF
NDYKPLQNSGCQIVNSRDKEAGSSDKLPGNFWLTKWLSRLLSSNN
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtggcaagtgatggcaaaaggttattgttgatagaaagtactacctgttctaacgaggta
agggttgccctactagttaatgatagggttgtagagtttgaacaagaattcaaggaaaaa
agacaattaagaggtaatatatacgttgcttatataaagcgtatagagcctgctttgcag
gccgtgttcattgagtatggaaaaaataagcaaggttttttgtctttttctgagatatct
ctaaattactttaatattccagaaaaagagaaggaaattttccctgacgaaggctattcg
agtggtgtggactgttcaaatgataattgcacagaagaaggcctagattctacagctagt
aatgaatccagcagtggttttgtgagggaggtacctttacatagaaaatataagttacaa
gatgtgatttcagtaaatcaaaagttattggttcaattaactaaagaagaacgaggaaat
aaaggagcttcatttacaacatacgtaactttggtcggtagatactgtgttttcatgccc
aattccataagtaggggtggagtatctcgcagaattgaagataccaacgttagaaaacag
ttaaaggatatattagattcaataaatttaccaaaaagttcaggtttaatagtaagaact
gttggtgcaggaaaaagtaagaaagaaattgagcaagattacaataatttgaccttatta
tggcaaaatatccagcaaaacttctcttctttaaatgttccatcattaatttacaacgaa
gcagatgtagttatgagatctgtacgtgacttttgtagtaatgatacagaaattatagta
tctgatagagaagtttgtgaagcggtaagaaaatacactaaaaatgtgttacaaggaaaa
ttacgtcctaggttatatagaggctctgttccaatctttacttactatcgagtcgaagat
caaatttctgaattatatagcaatagagtagaattaccatctggtgggtctttggtgata
accttaactgaggcatttgtttcaatagacgtaaattcaggaaaaatgacaggagaagat
aacatagaagaaacggcttatagaactaatatggaggcattatctgaaatatcaaggcaa
gcgaatctcaggggcttatcagggttaatagttgttgattttattgacatgttgaaactt
gagtattgcaaaaatgttgaatttgctatcaagcaggcgtttaaagatgatagagctaaa
gttcaatttagctttatcaatgactttggtttaatggtcttttcaagacaaagaattaaa
ccaaatatacaggaaattaatactacagagtgtttgcgctgtaaaggtattggaagagtg
aaatcaaacgaagtggttgttgcatcgatactaagggatttgcaacatattgctaataaa
aatcaaaataagtcctttgatttaatagcacgcagtgcagttatagcgcacatttttaat
aataagcgtgatatggtttctacaatcgaaaaagagttcaatattacattaaatgttagt
attgataatagtttagatgcagatacatttattttaaagcaaggagatcatgttaatttt
aatgattataagccattgcagaattctggatgtcaaattgtgaatagcagggataaagaa
gctggtagttcagataaactaccgggcaacttttggttaactaaatggctttcgcgcctt
ttgagctctaacaactaa
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