Wolbachia endosymbiont of Drosophila simulans wNo: wNo_11000
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Entry
wNo_11000 CDS
T02641
Name
(GenBank) Putative exonuclease family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
wed
Wolbachia endosymbiont of Drosophila simulans wNo
Pathway
wed03030
DNA replication
wed03430
Mismatch repair
wed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
wNo_11000
03430 Mismatch repair
wNo_11000
03440 Homologous recombination
wNo_11000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wed03032
]
wNo_11000
03400 DNA repair and recombination proteins [BR:
wed03400
]
wNo_11000
Enzymes [BR:
wed01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
wNo_11000
DNA replication proteins [BR:
wed03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
wNo_11000
DNA repair and recombination proteins [BR:
wed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
wNo_11000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
LRR_4
LRR_6
RNase_H_2
LRR_8
Motif
Other DBs
NCBI-ProteinID:
AGJ99465
LinkDB
All DBs
Position
complement(1243699..1244976)
Genome browser
AA seq
425 aa
AA seq
DB search
MNFGEYVHDKALTISNVSAKIDVRKLVNFLQNKKDIKELNLINVEVDSKDVKELGKLTHL
TSLTLRNNKLGFEGAGYIGQGNLPNLTLLEISNNHIGDIGFAFLIGSKRLPNLTLLNVEN
NNIVGVWRHHYGGDIALKNLTSLYVEGNGKKFLNDKEVILDSIKKSAITEAPGHSRVKDG
EGATKKLVAKRKKTIQATNSQSDPSSRLSIELSKQDGLREIVLDTETTGLDVNSHRIIEI
GCVELINRIPTGKVFHRYINPERSIDKGAFKVHGISEEFLKDKPLFSEIASEFLNFISSD
TLVIHNAVFDIKFLNMELGKLNAKLISSDRVLDTLPLVRKRFGPPASLSALCERFGISLE
SRKLHGALIDAELLAKVYIERLQTPLDRCQHTVRFREHLPSNEEVSKQLDKINVSVHEGV
VDRRL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaattttggcgaatatgtgcatgataaagctttaacaatatcaaatgtaagtgctaaa
attgatgtaaggaagctggtaaactttctacagaataaaaaagacattaaagagcttaat
ttaataaatgtagaggttgattctaaagatgtaaaagaactaggtaaacttacacatctt
acttcgctcactctaaggaacaataaactcggtttcgaaggtgcaggatatataggtcaa
ggcaatctaccaaaccttactttacttgaaataagcaataatcatattggcgatataggt
tttgcatttttaattggcagcaaacgtctcccaaatcttactttattaaatgtagaaaac
aacaacattgttggagtgtggcgccaccactatggaggagatatagcactcaaaaatctc
acctcactttatgtagaaggtaacggtaaaaaattcttgaatgataaagaagttatcctt
gatagtataaaaaaaagcgcaataaccgaagcgcctggacactctagagtaaaagatggt
gaaggtgctacaaaaaaattagtagctaaaagaaaaaaaacgatacaagctaccaatagt
cagtcagatcctagtagtaggttaagtatagaactttccaaacaagatgggctgcgtgaa
atagtacttgacactgaaactacaggtcttgacgtcaatagccatcgaattattgagata
ggatgtgtggagttaattaatcgtattccaacaggcaaagtattccatcgatacatcaac
ccagaaaggagcatagacaaaggtgcatttaaagttcacggtatcagcgaagaatttcta
aaggataagccattattttcagagattgcatctgaatttcttaattttatatctagcgat
actttggtaattcacaatgctgtatttgacattaaatttttgaacatggaacttggtaaa
ctgaatgccaaattaatctcttcagacagagtgttagatacattaccgcttgtaagaaag
agatttggaccaccagcttctttaagtgcattgtgtgagcgttttggtatatcactagag
agtaggaagttacatggagcgctaattgacgctgagttgctagcaaaagtatatattgag
cgattacaaactcctttggatcgatgtcagcatacagtacgttttagagaacacttgcca
agtaatgaagaggttagtaagcagttagataagattaacgtatctgttcatgagggagta
gtagatagaagattgtaa
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