Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020: R0F62_03475
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Entry
R0F62_03475 CDS
T09658
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
wedc
Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020
Pathway
wedc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wedc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
R0F62_03475 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wedc03021
]
R0F62_03475 (rho)
03019 Messenger RNA biogenesis [BR:
wedc03019
]
R0F62_03475 (rho)
Transcription machinery [BR:
wedc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
R0F62_03475 (rho)
Messenger RNA biogenesis [BR:
wedc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
R0F62_03475 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_22
AAA_25
AAA
ATPase_2
OB_RNB
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WOE62230
LinkDB
All DBs
Position
660058..661461
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AA seq
467 aa
AA seq
DB search
MTTINEDVLAKGKVTAQPEKSEQIYNNDTVKQMVNEGTEKNRKTLDLSELKEKTAEELLE
LAEERKISTNGKSNGRMLKQEIIFSLMKKMSEEGGITTGSGIVEILPDGFGFLRSASANY
APSTDDVYISNGQIKKFNLRTGDMAYGEIRPPGDKERYFTLTKVQSINSTEVSELRKYVH
FDNLLPLYPEESIVLECNNGDDKKGLSMRAIDIVAPLGKGQRALVVAPPRTGKTVLLQQM
ANSIAINHPEVELIVLLIDERPEEVTDMIRSVKGEVVSSTFDEPAYRHVQLAEIVIEKAK
RMVEHKKDVVILLDNITRLARAYNAVIPSSGKVLTGGVDSNALQRPKRFFGAARNIENGG
SLTIIATALIETGSKMDEVIFEEFKGTGNAEIILDRKLSDKRIFPAIDITKSGTRKEELL
VDKAILNKIWVVRRILNPMGPVEAMEFLRDKLLLTKSNADFFNSMNH
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaatcaatgaagatgttttggcaaaaggaaaggttacagctcaacctgaaaaa
agtgagcaaatttacaataacgatacagtaaaacagatggtcaatgaaggtactgagaaa
aacagaaaaacattagatctgagcgaattaaaagagaaaacagcagaagaattgttagag
ttagctgaagaaagaaaaatttcaactaacggtaaaagcaatggtagaatgctaaagcag
gaaataatattcagcttaatgaaaaaaatgagtgaagaaggaggcataaccacagggagt
ggaatagtggaaatattgcctgatggttttggtttcttacgttcagcaagtgcaaattat
gccccaagtaccgatgatgtttatatttctaacgggcaaataaagaagtttaatttacgt
acaggagatatggcatatggagaaataaggccacctggtgataaagagagatattttact
ttaactaaggttcaaagtataaactctactgaagtaagtgaattaagaaagtacgtccat
tttgataatttgcttcctctttatcctgaggaaagcatagtacttgagtgtaataatggt
gatgataaaaaaggcttaagcatgcgtgctatagatatagtagctcctcttggaaaaggg
caaagagcgttagtagttgctccacctcgcacaggaaaaactgtattgcttcagcaaatg
gctaactctatagctataaatcaccctgaagtagaattaatagtgttacttatagatgaa
agacctgaagaagtaacagatatgatacgttctgtaaaaggtgaggtagtaagttctaca
ttcgatgagcctgcttaccgtcacgtacagcttgctgaaatagtaatagaaaaagctaaa
agaatggttgagcataaaaaagatgtggtaattctacttgacaatattactagacttgca
cgtgcttataatgcggttattccttcgtctgggaaagttctaactggtggtgtagattca
aacgcactgcagagaccaaaacgcttttttggagcagctcgtaatattgagaatgggggt
tctttaactataatcgccacagctcttatagagactggttcaaaaatggatgaagttatt
tttgaagagtttaaaggtacagggaatgctgagatcatacttgatagaaaactttctgat
aaacgtatatttccagctattgatattacaaaatccggaacaaggaaggaagagctatta
gttgataaggctatactaaataaaatatgggtggtgcgtaggatactcaatcctatggga
cccgttgaagcaatggaatttttacgtgacaaactacttttaacaaagagcaatgctgac
ttttttaactccatgaatcactaa
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