Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020: R0F62_04740
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Entry
R0F62_04740 CDS
T09658
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
wedc
Wolbachia endosymbiont of Drosophila aff. chauvacae BK-2020
Pathway
wedc03030
DNA replication
wedc03430
Mismatch repair
wedc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wedc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R0F62_04740 (holA)
03430 Mismatch repair
R0F62_04740 (holA)
03440 Homologous recombination
R0F62_04740 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wedc03032
]
R0F62_04740 (holA)
03400 DNA repair and recombination proteins [BR:
wedc03400
]
R0F62_04740 (holA)
Enzymes [BR:
wedc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R0F62_04740 (holA)
DNA replication proteins [BR:
wedc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R0F62_04740 (holA)
DNA repair and recombination proteins [BR:
wedc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R0F62_04740 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
WOE62447
UniProt:
A0AA97F1W2
LinkDB
All DBs
Position
899909..900901
Genome browser
AA seq
330 aa
AA seq
DB search
MRVTPSKVKKFLEKPDALRGVLIHGSDNSRVDFYVQEIIANLGEYSVQVMDFAIVNKSPS
LLFSELANVSMFTSKKLIKLINVSGGISKELKNVLDYNASGHYVMMVANDLPYNSATKSY
MESSKIFGVIACYKDSNSNLYDIISSYLKQNDIKCTNEIIYHLQSYFNHSKLPICSELEK
LVLYLGERKDLKLTDIELCFSTSGNDYATLDDLCSAIASKDMSRFIRISDALISQENFSP
IALIRIISNYFLRLENVLLSVQGGMSEQAAIDQLSPPLFFKQLQSFKSHLKSLQLSELKK
ILEKLISLEVTCKKTDLDHKMIFQHALTGS
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcacaccatccaaagttaaaaaattcctagagaaacctgatgctttacgtggt
gtgttaattcatggaagtgataacagtagggttgatttttatgtacaagaaataattgct
aatttgggtgagtattcagttcaggtgatggattttgcaatagtgaataagtcacccagt
ttactgttttctgaattggcaaacgtttcgatgtttaccagcaaaaaattaattaagctg
ataaatgtgagtggaggtatatccaaggagttaaaaaatgtattggattataacgcaagt
ggtcattatgtaatgatggtagcaaatgatcttccatataattctgcgactaaaagttat
atggagagttcaaaaatttttggtgtgattgcttgctataaggacagcaacagcaatctt
tatgacattatatcaagttacttaaaacaaaatgatataaaatgcacaaatgagataatc
taccatttgcaatcttactttaatcatagcaagctgcctatatgttcagaacttgagaag
ttagttttatacttaggggagagaaaagacctaaaacttactgatatagaattatgcttt
tcaacttccggcaacgactatgctacacttgatgatctatgctctgccatagcaagtaaa
gatatgtcgcgtttcattagaatttctgatgcattgatatcgcaagaaaatttttcaccg
atagcactaattcgcattatatcaaattatttcctacgccttgaaaacgttttgctgtca
gtgcaaggtggaatgagtgagcaggctgcgattgatcagctaagccctccattgtttttt
aaacaattgcagagttttaaatctcatttgaaaagtttgcaactttcagaacttaagaag
atcttggaaaaattgataagcttagaagttacctgtaaaaaaactgatttagatcataaa
atgatttttcaacatgcactgacaggtagctga
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