Wolbachia endosymbiont of Corcyra cephalonica: LOK48_00575
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Entry
LOK48_00575 CDS
T07919
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
wee
Wolbachia endosymbiont of Corcyra cephalonica
Brite
KEGG Orthology (KO) [BR:
wee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
wee03016
]
LOK48_00575
Enzymes [BR:
wee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LOK48_00575
Transfer RNA biogenesis [BR:
wee03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LOK48_00575
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF2251
DUF7222
Motif
Other DBs
NCBI-ProteinID:
UFO00482
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All DBs
Position
complement(115510..116694)
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AA seq
394 aa
AA seq
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MLISTTSELENACEELMAKDPKFIAVDTEFIRNNLTYYPRLSLIQISYGEKSFIVDVLVP
GIDLSLIKKIMLNREITKVFHSCRQDIESLLTVLKCVPTPIFDTQVAAMFCHYYHDFIGY
SKVVEQYQGVALDKIKAKNSDWLKRPLSEDQLDYAVNDVIHLYDLHQILCNKLEENNRIG
WFQEEMESIVDVNKYLHNPKDAWKRIKFNYEANPRLMLTVKAVSEWQETLAQRYNINRNK
VVNNAVIIGLIEKNVERIDEVLDDLKRNTKNIKEEDLLEFMNIFNENEKEFVQQNYTLSD
NYDKSVFDILSIILESKCKENNISRKLVSSKDELAGSISGKIDKLFKGWRYDFFGRSVES
FLNAGSRFEILMVKSADSTAKIRSNLVENNRITC
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctaattagtacgacatcggagctggagaatgcatgtgaagaattgatggcaaaagat
ccaaaatttatagcagtggacacagagtttattagaaacaatttaacctactatcctaga
ttatcactaattcaaatttcttacggagagaagagttttattgtagatgtgttagtaccg
ggaattgacttatcgcttattaagaaaataatgctgaatcgagaaataaccaaagttttt
catagttgtcggcaagacatagaatccttactcaccgtgcttaaatgtgttcctactccc
atttttgatacccaagttgctgctatgttttgtcattattatcacgactttattggttat
tcaaaagtagtagagcaatatcagggggtagcgctggataaaattaaagctaaaaattca
gactggttaaaacggccattatctgaggatcaattagattatgcagtaaatgacgtgata
cacctatatgacctacaccaaatattgtgcaataaacttgaagaaaataataggataggc
tggtttcaagaagagatggaatcaatagttgatgttaataagtatttgcataatccaaaa
gatgcatggaagaggattaaatttaattatgaagcaaatccaaggttgatgttaactgtt
aaagcagttagtgagtggcaagagaccttagcacagcgttacaatataaatcgtaataag
gtagtcaataatgctgtaataattggtcttattgaaaaaaatgtggagcgtattgacgag
gttttagatgaccttaagagaaacacaaaaaatataaaagaggaagatttattagaattt
atgaatattttcaatgagaatgagaaggagtttgtgcagcaaaattatactctgtcggat
aattatgataaatctgtctttgatatactctcgattattttagagagcaaatgtaaggaa
aataacatatcgagaaagttagtttcgtcaaaagatgagttagctggatcaatatctggg
aagatagataaattgttcaagggatggagatatgattttttcggcagatcagtagaatcg
tttttgaatgcaggctcaaggtttgaaattttaatggtaaaatctgctgatagtacagct
aaaattcggagtaatcttgtggagaataaccgtatcacgtgttga
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