Wolbachia endosymbiont of Corcyra cephalonica: LOK48_03960
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Entry
LOK48_03960 CDS
T07919
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
wee
Wolbachia endosymbiont of Corcyra cephalonica
Pathway
wee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
wee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOK48_03960 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wee03400
]
LOK48_03960 (uvrB)
DNA repair and recombination proteins [BR:
wee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOK48_03960 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LOK48_03960 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Microtub_bd
Stathmin
AAA_5
HI0933_like_1st
Motif
Other DBs
NCBI-ProteinID:
UFN99933
LinkDB
All DBs
Position
complement(796988..798922)
Genome browser
AA seq
644 aa
AA seq
DB search
MEFQIVTHFQPAGDQPQAIDNLVAGLNSNKRDQVLLGVTGSGKTFTMANVIARTNRPALI
MAHNKTLAAQLYEEMRGFFPHNAVGYFISYYDYYQPEAYSPQTDTYIEKDSLINERIDML
RYSAICSLLERRDTIVVASVSCIYGLGSPESYLSMTLTLSAGDKIHVNDFLNNLVNLQYK
RSDVRFERGYFRVRGDIIDIFPAYYENKAWRLSLFGDEIEEISEIDAMNGNIIRRIDTVT
IFPNSYYTTSRETLLQAVQLIKKELHERLDYYYSQNKIVEAKRLEQRTNFDIEMMMATGV
CKGIENYSRYLYGMKAGDPPPTLFEYLPKDVILFVDESHVTVPQIGAMYSGNEARKKKLI
DYGFRLPSAFDNRPLKLEEWEAIRPQTIYVSATPGKYELEKTNHAFIEQVIRPTGLTDPI
CTIKPTESQVDDVIHEAQVTIKKGFCILITTLTKKMAEKLAEHMSELSMKVTYLHSDIGA
LERIEIICKLRSKEIDVLVGVNLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRA
ARNVEGRVILYADKITNSMDRALKETERRRKKQTEHNTLHNIVPKTIIKPISNTLQEKVV
VENFSKDDLNSLKKQMLKHAENLEFEEAAKIKGIIEKFNNRPVT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcaaatagttacacattttcagccagctggagatcaaccacaggcaatagac
aacttagttgcagggttaaatagtaataaaagagatcaggttttacttggagtaactggc
tctggaaaaacttttactatggcaaatgttattgcaagaacaaacaggcctgcgttaatt
atggcacataataaaactttagcggcgcagctttacgaggagatgagaggattttttcct
cacaatgctgttggatacttcatttcttattatgattattatcagcctgaggcttattca
ccacaaacagacacttatattgaaaaagactctttaataaatgaaagaattgatatgcta
cgctattctgctatatgctctcttttggagcgtagggacacgattgtagttgcgagtgtt
tcttgtatatatggtcttggttcgcctgagagctatctcagcatgaccttgactttaagt
gctggagataagattcatgttaatgactttctgaataatttagttaatctccaatataaa
cgttctgatgtcagatttgagcgaggatatttcagagtgcgcggcgatattattgatata
tttcctgcctattatgaaaataaagcttggcgtttatcattgtttggtgatgaaatagag
gaaatttctgagattgatgccatgaacggcaatattatcagacgcatagatacagtcacc
atttttccaaatagctattacactacatcacgtgagactcttttgcaagcagttcaattg
attaaaaaagaactacatgaacgcctggattattactattcacagaacaaaattgttgaa
gcaaaacgccttgagcagcgtactaattttgatattgaaatgatgatggcaacgggagtg
tgtaaaggtattgaaaattattcgcgttatctttacggaatgaaagccggagatccaccg
cctacattgtttgagtatttacctaaagatgtaattttatttgttgatgaaagccatgta
accgttccccagataggtgcaatgtatagcggtaatgaagcacgtaaaaagaaattgata
gattatggttttaggctaccttctgcttttgataaccgtccattaaaattggaagagtgg
gaggcaatacggccacagactatttacgtttcggctactccaggaaaatatgaattagaa
aagactaatcacgcatttatagagcaagttatccgcccaacaggactgacagatcccatc
tgcaccataaaaccaacagagagtcaggttgatgatgtgattcacgaggcgcaagtaaca
ataaaaaaaggattttgtattctaattaccacattgacaaaaaaaatggctgaaaagcta
gctgagcatatgagtgagctcagtatgaaagtaacttacctacattcagatattggtgca
ctggaaagaattgaaattatatgcaaattaagatctaaagaaatagatgttcttgttggc
gttaacttgttgcgggaaggtcttgatattcccgagtgtggattggttgcaattttagat
gctgacaaagaagggtttttacgatcagagacttcgctcattcaaacgataggtcgtgct
gcacgaaatgttgaaggcagagtaattttatatgcagacaaaattactaattctatggat
cgtgcactgaaagaaactgaaaggagaagaaagaaacagacagagcataatacactgcat
aatattgtaccaaaaactataataaagcctatatcaaatactttacaggaaaaagtggta
gttgagaattttagcaaggatgatctaaatagtttgaaaaagcaaatgttgaagcatgct
gaaaatttagagtttgaagaggcggcgaaaataaaaggtattattgaaaaatttaataac
agacccgttacataa
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