Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis: GOY12_01975
Help
Entry
GOY12_01975 CDS
T07699
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
wef
Wolbachia endosymbiont of Dirofilaria (Dirofilaria) immitis
Pathway
wef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GOY12_01975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wef03019
]
GOY12_01975
03009 Ribosome biogenesis [BR:
wef03009
]
GOY12_01975
Enzymes [BR:
wef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
GOY12_01975
Messenger RNA biogenesis [BR:
wef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GOY12_01975
Ribosome biogenesis [BR:
wef03009
]
Prokaryotic type
rRNA processing factors
GOY12_01975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
QKX02323
LinkDB
All DBs
Position
complement(501802..503577)
Genome browser
AA seq
591 aa
AA seq
DB search
MANSSKRLLLIENSICSDEVRIALLVNNKVVEFEQEFKEKRQLRGNIYVAHVKRIKPSLQ
AVFIEYGKNKQGFLSFSEISPDYFNISEKEKEAFFGNCSNGGYTEEDSSTSTNVSSDYAV
NRNVNESNNGFVREVSLYNLYKRYKLQDVIAVNQKMLVQLTKEERGNKGASFTTYITLVG
RYCVFMPNSMSRGGVSRKIEDTSIRKQLKDVLDSMDLPKRSGLIIRTVGSGKSKKEIEQD
YNYLFSLWQSIQKNASSANVPSLIYNEADLIMRSIRDFCSNDVEVIVSGKEAFEVVRQYA
ENALKGSKLRYRLYRGFIPIFTYYGIEDQVSELYSNRVKLPSGGSLIITLTEAFVSIDVN
SGKMMGEDSIEETAYRTNMEAVPEISRQVNLRGLSGLIVVDFIGMLKYQYCRAVEFAVRQ
AFKDDKARVQFSYINDFGLMVFSRQRIKPSIQEINTTECLHCKGVGKVKSNEVIVASILR
ELQYVASRNRNGSFDLSAHGSIIAHIFSNKRDTVSTIEREFNIKLNVSVDNNLNVDVFIL
KRGDEVSLSDCKPLQNSGYKVEGRDNEKIDYSGGLQNNFWLTRWLSRLCKL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaatagtagtaaaaggttactattaatagaaaattctatctgctctgatgaggtg
aggattgctttgttagtcaataataaggttgtagaatttgagcaagaattcaaggaaaaa
aggcaattaagaggtaatatatacgttgctcatgtaaagcgtataaagccttctttgcaa
gctgtatttattgagtatgggaaaaataagcaaggttttttatctttttctgaaatatct
ccggattattttaatatttcagaaaaggagaaggaagctttttttggaaattgttcaaat
ggtggttatacagaggaagatagtagtacatcaacgaatgtttcttcagattacgcagtt
aatagaaatgttaatgagtctaataatggatttgtaagggaagtatctttatataattta
tataagaggtataagttacaggatgttattgcggttaatcaaaaaatgttagttcaactg
actaaagaggaacgtggtaacaagggggcttcatttacaacttatataactttagtaggt
aggtactgtgttttcatgccaaattctatgagtagaggtggagtatctcgcaaaattgag
gacactagtatcagaaagcaattaaaagatgtacttgattcaatggacttgccaaaaagg
tcaggtttaataattaggactgttggctcaggaaagagcaagaaagaaattgaacaggat
tataattatttattttcattgtggcagagcatccagaaaaatgcttcctctgcaaatgtt
ccatcgttaatttataacgaagcagatttaattatgagatctattcgtgatttttgtagt
aatgatgtagaagttatagtgtctgggaaggaagcttttgaagtagtgagacaatatgct
gagaatgcgttaaagggtagtaagttgcgttataggttgtatagaggttttattccgata
tttacttactatggaattgaggatcaagtttctgagttatatagcaatagagtaaaattg
ccatctggtggttctttaataataactttaactgaagcatttgtttcaatagatgtaaac
tcgggaaaaatgatgggggaggatagtatagaagaaacagcttataggaccaatatggaa
gcagtacctgaaatatcaaggcaagtgaatttaagaggcttatcagggttaatagtagta
gattttattggtatgttgaaatatcagtattgtagagctgttgaatttgctgttagacag
gcgtttaaagatgataaagcaagggtccagtttagctatataaatgactttggtttaatg
gtgttttcaaggcaaaggattaaaccgagcatacaggaaatcaatactacagaatgttta
cactgtaagggagttggtaaggtaaagtcaaatgaagtaattgttgcgtcaatattaaga
gaattacagtatgttgctagtagaaatcgaaatgggtcgtttgatttatcagcgcatggt
tcaattattgcacatatttttagtaataagcgcgataccgtttctacgatcgaaagagag
tttaatattaaattgaacgttagtgttgataataatttaaacgtagatgtgtttatttta
aaacgaggagatgaagttagtttaagtgattgtaagccactgcaaaactctggttacaaa
gttgagggcagagacaatgagaagattgattactcaggtgggttacaaaataacttttgg
ttgactagatggctttcgcgtctttgtaagctctaa
DBGET
integrated database retrieval system
