Periweissella cryptocerci: EQG49_02005
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Entry
EQG49_02005 CDS
T06454
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
wei
Periweissella cryptocerci
Pathway
wei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EQG49_02005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wei03400
]
EQG49_02005
Enzymes [BR:
wei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EQG49_02005
DNA repair and recombination proteins [BR:
wei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EQG49_02005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
AAA_22
nSTAND3
AAA_28
HTH_IclR
SLFN-g3_helicase
RsgA_GTPase
DUF7227
AAA_29
T2SSE
AAA
AAA_16
NPHP3_N
DUF7310
TsaE
Motif
Other DBs
NCBI-ProteinID:
QBO35322
UniProt:
A0A4P6YRU3
LinkDB
All DBs
Position
complement(447220..449853)
Genome browser
AA seq
877 aa
AA seq
DB search
MDEEMTLFEEETTTPYVLGKVSAVFFAASDSFYKVVALRVLENNFGWKEKEIVATGSFGE
LQEDGTYRFFGKLVNHAKYGQQLQVTNYKSEGTNTEHGLITYLSGELFTGIGEKTAERIV
DLLGMDAINTIISDPDSLASLGLKNDVVENLVETLRLNNGMEQVVIGLNEYGFGSTLATA
IYQKYKTDTLEIIRNNPYQLAEDIEGISFKRADQLAAVVGIEPDAPVRVQAGLLATLDQQ
SFNSGDVYMQVPQLLEQARHLLETARNIAIDRDILQQALLDLAQANKVVAEDTRIYLASL
YEAEWRSAEWLDRLDAQTDAIQYADEKIEKVLKKVEKRLKIKYDDRQKAAIVEAIKSPVF
LLTGGPGTGKTTIINGLVATFAELREIDLDVNAYKDDTFPILLAAPTGRAAKRMSETTGL
PASTIHRLLGMTGREKNTVPDIEDLKGALLIVDEMSMVDILLFRTLLQAIPLKMHVVFVG
DKDQLPSVGPGQVFSDLLASQHFNQVELTQIYRQENASSIIPLAHDIKDGQLPADLTVNQ
PDRTFIFAHAQQVPKVVEQVVKKAQDAGFAYNDVQVLAPMYRGTAGINNLNVVAQNVLNP
LKTAKSREVEFNGQKFRVGDKILQLVNSPESNIFNGDIGKITGIMLAKDKGNVEKVDQLT
IAFDAGEVTYPRSEWNRLTLAYATSIHKAQGSEFKLVIMPLVGAFSIMLQRNLLYTGITR
ASEMLIMIGEPDAFVRSVNNLGANRLTTLQARINTISDGGTTPELKKPETPSVAVADDVL
DTPTNVAEPVAKPALASKRLTPDVVENGSLADNMSFDIFETSVATPETSVVEPVTKATRD
DSSAMGTTLTLAMVTDGLVDPMVGMAEISPYDFMPNK
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaatgaccttgtttgaagaagaaactacgacaccttatgtcctaggcaaa
gtgtcggccgttttttttgcggctagcgatagtttttataaagtggttgctttgcgcgta
ttggaaaataactttggttggaaagaaaaagaaattgttgccacgggttcttttggcgaa
ttgcaagaggatgggacataccgcttttttggtaaactggtgaatcatgctaagtatggg
caacagctacaagtcacaaactacaagagtgaaggtacgaacacggagcatgggttaatt
acctatttgtcgggcgaactttttacggggattggcgaaaagaccgccgagcggattgtt
gatctgttaggcatggacgcgattaataccattatttcggatcctgatagtttagcttca
ttaggcttgaaaaacgatgtagttgagaatttggttgaaacattgcggttaaataatggg
atggaacaagtcgtaattggtttgaatgaatacggctttggttcgacgttagcgacggct
atttatcaaaaatacaagaccgataccttggaaataattcgcaacaatccgtaccagttg
gccgaagatattgaaggcattagttttaaacgggcggatcaattggctgcagtggttggc
attgaacccgacgcaccagtccgcgtgcaagcagggttactagctactttagaccaacag
agttttaattctggggacgtctacatgcaagtaccccaattgttggagcaagcgcgtcat
ttgttagaaacggcccgcaatattgccattgaccgtgatattttacaacaggcgttacta
gacttggctcaagcaaataaagtggtggccgaagatacgcgcatttatttagcgagtttg
tacgaagcggaatggcgtagtgcagaatggcttgatcgcttggatgcgcaaaccgatgcc
atccaatatgcggacgaaaaaattgaaaaagtcctcaaaaaagttgaaaaacggctgaaa
attaaatatgatgaccgccaaaaagccgcgattgtcgaagcgattaagagtccagtcttt
cttttaacgggtggaccggggactggtaagacgactattattaatggattagtcgcaacc
tttgccgagctgcgtgagattgatttggacgtgaacgcctataaagacgacacctttcca
attctattggctgcaccaactgggcgtgcggccaagcggatgagtgaaacaactggttta
ccagctagcacaattcaccggttgctggggatgactgggcgcgaaaagaacaccgtccct
gatattgaagatttaaaaggggcgcttttaattgtcgatgaaatgtcgatggttgatatt
ttacttttccggacgctgctacaagccattccattaaaaatgcacgtggtcttcgtgggt
gataaggatcaattaccatcagttggccctgggcaagtattcagcgatttattagcgagt
cagcatttcaatcaagttgaattaacccagatttaccggcaagaaaatgcaagttcgatt
attccgttagcccacgatattaaagacggccaattgccggctgatttgaccgtgaaccaa
ccagatcggacgtttattttcgctcacgcccaacaagtgcctaaagtcgtggagcaagtc
gtcaaaaaagctcaagatgcgggctttgcgtataatgatgtgcaagtcctcgcaccaatg
tatcgtggcacggcaggaattaataacctaaatgtagttgcgcagaacgttttgaacccc
ttgaaaacggcaaaatcacgcgaagttgagttcaacgggcaaaaatttcgcgtgggtgat
aagattctgcaactcgtgaatagtcctgaaagcaacattttcaatggtgacatcgggaaa
ataaccggcatcatgctcgccaaagataaaggcaacgtcgaaaaagtcgatcaactcaca
attgcatttgatgcgggtgaagtcacgtatccgcgttcagagtggaatcgcttaacgctc
gcttatgcaacttcgattcataaagcccaaggtagtgaattcaaattagtgattatgcct
ttggttggagcgttttcgattatgctccaacgtaatttactctacacagggattacgcgg
gcaagtgaaatgctaattatgattggggaaccggatgcgtttgtccgcagtgtcaacaat
ctaggcgctaaccgtttaacaaccttgcaagcacggattaatacgatttctgatgggggc
acgacgccagaactaaaaaaacctgaaacaccaagcgtggctgttgccgatgatgtgctg
gacactcctactaacgtggctgagccagtagctaaaccagcactagcgtctaagcgcttg
accccagacgtagttgaaaacggctccttggcggataatatgtcatttgatatctttgaa
acaagtgtcgccacgcctgaaacgtcggtggtagaacctgttactaaggctactagggat
gattcctcagcgatggggacgacattaacgctagcgatggtaacagatgggttagttgat
ccgatggtggggatggctgaaatttcgccctatgattttatgcctaacaaataa
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