Periweissella cryptocerci: EQG49_02620
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Entry
EQG49_02620 CDS
T06454
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wei
Periweissella cryptocerci
Pathway
wei03410
Base excision repair
wei03430
Mismatch repair
wei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EQG49_02620 (recJ)
03430 Mismatch repair
EQG49_02620 (recJ)
03440 Homologous recombination
EQG49_02620 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wei03400
]
EQG49_02620 (recJ)
DNA repair and recombination proteins [BR:
wei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EQG49_02620 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EQG49_02620 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EQG49_02620 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
DHH
RecJ_OB
DHHA1
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
QBO35436
UniProt:
A0A4P6YS24
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Position
complement(557881..560193)
Genome browser
AA seq
770 aa
AA seq
DB search
MIEARYKWERPVVADEAAAQILTTELQLEPVIAKVLVNRGYDTLAKANEFLNPSPEQIND
PWLLHDMDKAVARINEAIMNGERITVYGDYDTDGLTSTALMYETLEMVGADVNYYVPNRF
NDGYGPNVEAYERLIGEGTQLIVTVDNGVAGHAAIARAKELGVDVVVTDHHELPETLPDA
YAIVHPRHPEGTYPFGELSGVGVAFKVATALLEEIPQEMLDLVALGEIADLVDLVGENRT
LVTYGLKMIEQTQRPGLLALMDVAGVQKDAVTATTVGFSLAPRLNALGRLGDAGTGVELL
TTQDEEVATELAKKIDTLNIERQALVASIGDAAMAQAMQPENLERQTLVITGAGWHEGVL
GIVASRVVEETGKPTLVLREEDGILKGSGRSVPAFNLFTALDAHRELFVAFGGHAAAAGM
SVAVEQLSALQTAFEAEALQQDLADAEKPALKIATLMTPSDVTPTLYRQLQSLGPFGNGN
TEPLFVFEPATLSNVKAIGAEGKHLKFALSGENQPNLNAIAFGRGSLANDLVANDQGVQV
VGSIEENVWKGNTSFQLMVKDILQEGLTIVDGRTNKLQPQLFTEVAQYVFFNPKVKTQLL
AYLPEGSHVVDVTAGDVLTDGQLTVLVDLPKQLDDLSVLQGHTFSRLTAIFYAAHQVYLE
KNPSKEEFGKLYKYALTHTDLPIRAQTETIAKYLNIDKNRLYFMITVFFELGFVTIDDGN
LNGVANPPHAELTTAPSYQARIQKQAVEKALIYSKTTELKTLLHQWIDQA
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgatagaggcacgttataagtgggagcgtccggtagttgcggatgaagctgccgcccaa
attttaacaacggaactccaactagaaccagtgattgctaaagtccttgttaatcgggga
tatgacacactggcgaaagcaaacgaattcttgaatccaagtccggaacaaatcaatgat
ccatggttgttacatgacatggataaggcagttgcacggattaacgaagcaatcatgaac
ggtgaacgaatcacagtttatggtgattatgataccgatggattgacgagtacggcgttg
atgtatgaaacgctggaaatggttggtgcggacgttaattattatgtgcctaaccgattt
aatgatggatacgggccaaatgttgaagcatatgaacgtttaattggtgaaggcacgcaa
ttgatcgttacggttgataatggggtcgcgggacatgcggccatcgctcgagctaaagaa
cttggggtagatgtcgtagttactgatcaccacgaattgcctgaaacattacccgatgcg
tatgcgattgtgcatccacggcatcctgaaggtacgtatccatttggtgaactatcgggt
gtcggggttgcttttaaggtggcgacagctttactagaagaaatcccccaagaaatgtta
gacctggtggcgcttggtgaaattgctgacttggttgatttagttggtgaaaatcggaca
ttggttacttatggtctaaagatgattgaacagacccaacgaccagggctgttagccttg
atggacgtggcgggtgtacaaaaagatgcagttacagcgacaactgtgggctttagttta
gcaccacggttgaacgctttaggacgacttggtgatgctggtactggggtcgaactttta
acgacccaagacgaagaagttgcgacagaattagctaaaaaaattgacacattaaatatt
gaacgacaagcactagttgcaagtattggtgatgccgcgatggctcaggcgatgcaacca
gagaacttagagcgccagacattggtaattaccggtgcgggttggcatgaaggtgtattg
ggaattgtggccagccgagtggttgaagaaaccggtaagcctacgttggttttgcgcgaa
gaagatggtatcttgaagggctctggccgttcagtgccagcctttaatttatttacggcg
cttgatgcccatcgtgagctgtttgtggcctttggtgggcatgcagccgcagctgggatg
tctgttgccgttgagcagttgtcggccttacaaacggcttttgaagctgaagcactgcaa
caagatttagctgatgcagaaaagccagctttaaaaattgcaaccttgatgacaccaagt
gatgtcacaccaacattatatcgacaactgcaaagtttaggaccatttggtaatggtaat
acggagcctttgttcgtgtttgaacctgccactttaagtaacgtcaaggcaattggagct
gaaggaaaacatctcaaatttgccttgagcggtgagaatcaaccaaacttaaacgcaatt
gcctttggccgaggaagtttagcaaacgatttagttgcaaatgatcaaggcgtgcaagtt
gtcggctcgattgaagaaaatgtctggaaggggaatacctcgtttcagttaatggttaaa
gacatcttgcaagaaggtttaaccattgttgatggccggacaaataagctccaacctcaa
ctttttacagaggttgcgcagtatgtattttttaatccaaaagtaaaaacacaattacta
gcttatttaccagaaggtagtcatgtagttgatgtgactgctggggatgtgttaacggat
gggcaattaactgtattggttgatttacctaagcaacttgatgatttaagtgtcttgcaa
ggacacacttttagtcgcttgacggcaatattttatgctgctcaccaagtttatttagaa
aaaaatcctagtaaagaagaatttgggaagttgtataagtatgcgttaacgcacacagat
ttaccaattcgtgcgcaaacggagacaattgccaaatatctaaatattgataaaaaccgg
ctatattttatgattaccgtgttttttgaactgggatttgttacaattgacgatggtaat
ttaaatggagtagctaatccaccacatgccgaacttacaaccgcgccgagttatcaagcg
cgaattcaaaaacaagcagtcgaaaaagcgttaatctatagtaaaactactgaacttaaa
acgcttctacaccagtggattgatcaagcataa
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