Wolbachia endosymbiont of Delia radicum: L2227_01790
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Entry
L2227_01790 CDS
T08243
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
wej
Wolbachia endosymbiont of Delia radicum
Pathway
wej03030
DNA replication
wej03430
Mismatch repair
wej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L2227_01790 (holA)
03430 Mismatch repair
L2227_01790 (holA)
03440 Homologous recombination
L2227_01790 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wej03032
]
L2227_01790 (holA)
03400 DNA repair and recombination proteins [BR:
wej03400
]
L2227_01790 (holA)
Enzymes [BR:
wej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L2227_01790 (holA)
DNA replication proteins [BR:
wej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L2227_01790 (holA)
DNA repair and recombination proteins [BR:
wej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L2227_01790 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UJQ21329
LinkDB
All DBs
Position
complement(355446..356462)
Genome browser
AA seq
338 aa
AA seq
DB search
MRVTPSKVKRFLEKPDALRGVLIHGSDNSRVDFYVQEIIASLDEYSVQVMDFAIVNKSPG
LLFSELANISMFTSKKLIKLINVSEGISKELKNVLDYNASGHYVMMTATDLPHNSATKSY
MESSKIFGVIACYKDSNSNLYDIISSYLKQNDIKCTNEIIYHLQSYFNHSKLPICSELEK
LVLYLGERKDLKLTDIELCFSTSGNDYATLDDLCSAIASKDMSRFIRISDALISQENFSP
IALIRIISNYFLRLETVLLSVQGGMSEQAAIDQLSPPLFFKQLQSFKSHLKSLQLSELKK
ILEKLISLEVTCKKTDLDHKMIFQQVICHITNTVTCYS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagggttacaccatccaaagttaaaagattcctagagaaacctgatgctttacgtggt
gtgttaattcatggaagtgataacagtagggttgatttttatgtacaagaaataattgcc
agtttggatgagtattcagttcaggtgatggattttgcaatagtgaataagtcacccggt
ttactattttctgaattggcaaacatttcgatgtttaccagcaaaaaattaattaaactg
ataaatgtgagtgaaggtatatccaaagagttaaaaaacgtattggattataatgcaagt
ggtcattatgtaatgatgacagcaactgatcttccacacaattctgcaaccaaaagttat
atggagagttcaaaaatttttggtgtgattgcttgctataaagacagcaacagcaatctt
tatgatattatatcaagttacttaaaacaaaatgatataaaatgcacaaatgagataatc
taccatttgcaatcttactttaatcatagcaagctgcctatatgttcagaacttgagaag
ttagttttatacttaggggagagaaaagacctaaaacttactgatatagaattatgcttt
tcaacttccggcaacgactatgctacacttgatgatctatgctctgccatagcaagtaaa
gatatgtcgcgtttcattagaatttctgatgcattgatatcgcaagaaaatttttcaccg
atagcactaattcgcattatatcaaattatttcctacgccttgaaaccgttttgctgtca
gtgcaaggtggaatgagtgagcaggctgcgattgatcagctaagccctccattgtttttt
aaacaattgcagagttttaaatctcatttgaaaagtttgcaactttcagaacttaagaag
atcttggaaaaattgataagcttagaagttacctgtaaaaaaactgacttggatcataaa
atgatttttcaacaggtgatttgtcatattacaaatacagttacttgctatagctaa
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