Wolbachia endosymbiont of Delia radicum: L2227_06245
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Entry
L2227_06245 CDS
T08243
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
wej
Wolbachia endosymbiont of Delia radicum
Pathway
wej03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
wej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L2227_06245 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wej03400
]
L2227_06245 (mutM)
Enzymes [BR:
wej01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
L2227_06245 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
L2227_06245 (mutM)
DNA repair and recombination proteins [BR:
wej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L2227_06245 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF6661
NFACT_N
Zn_ribbon_6
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
UJQ21745
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All DBs
Position
1261391..1262206
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AA seq
271 aa
AA seq
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MPELPEVEVISNFLLDKIKNKQISNVIVNNWNLRAPITKNIDDMLKGKVIRNIKRRGKYT
IWNTDGSVAVIIHLGMSGKLIYADHDQMRNKHDHVVFLFSDNTSIIFNDPRRFGLVIVLN
KEQETDFFSDFGIEPLTDEFSGDYLQELLKNKKVNIKSALMDNKSIVGVGNIYASESLFR
ARISPLRSAKNLTYRECEKLAAEIKNTLSDAIAAGGSTLKDYAQPSGSAGYFQNNFYVYG
KVQKPCKICNNIITLIRQNGRSTYFCNACQN
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccggaagtggaagtaatctctaattttttgcttgataaaattaaaaac
aagcaaatcagtaatgttatagtgaataattggaatttacgtgccccaataacaaaaaat
attgatgatatgctaaagggcaaagtcatacgcaacatcaagcgtagaggtaagtatacc
atctggaatacagatggtagtgtggctgtaatcatacatcttggcatgagcggaaagctt
atatatgctgaccacgatcaaatgcggaataagcatgatcacgtggtatttttattttct
gacaatacttcaataatttttaatgacccaagaagatttggattagttatcgttttaaat
aaagaacaagaaacggatttttttagcgattttggaatagagcccctcacggatgaattc
agtggagactatttacaggagttgctgaaaaacaaaaaagtgaatatcaaatcagcgtta
atggacaataaatcaatagttggcgtaggcaacatatatgcttctgagagcttgtttaga
gcccgtatatcaccactcaggtcagcaaaaaacttgacctatagagagtgcgaaaaactt
gctgctgaaataaaaaatactctgagtgatgcaattgctgcaggtggttcaacactgaaa
gattatgcacagccatctggatctgctggatactttcaaaataacttttacgtatatggt
aaagttcaaaaaccttgcaagatttgcaataatatcataacacttatacgacaaaatggc
cgtagcacttatttttgcaacgcgtgccagaattaa
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