Wolbachia endosymbiont of Ostrinia scapulalis: M1L26_000434
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Entry
M1L26_000434 CDS
T08570
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wek
Wolbachia endosymbiont of Ostrinia scapulalis
Brite
KEGG Orthology (KO) [BR:
wek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wek03032
]
M1L26_000434 (topA)
03400 DNA repair and recombination proteins [BR:
wek03400
]
M1L26_000434 (topA)
Enzymes [BR:
wek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M1L26_000434 (topA)
DNA replication proteins [BR:
wek03032
]
Prokaryotic type
DNA Topoisomerases
M1L26_000434 (topA)
DNA repair and recombination proteins [BR:
wek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M1L26_000434 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
DUF1272
Motif
Other DBs
NCBI-ProteinID:
URG41389
LinkDB
All DBs
Position
complement(426003..428453)
Genome browser
AA seq
816 aa
AA seq
DB search
MALLIVESPAKAKTIGKYLSKEFKVAASFGHVRDLPAKNGSVDPDNDFAMKYEIIEKAEK
YVKELVKEASKTSDIYLATDPDREGEAIAWNVIEALKERKAINDESNIHRVVFNEITKRA
VQEAIKNPREINMDLVRAQQTRRALDYLVGFSLSPLLWTKLSGSKSAGRVQSVALKLICE
REDEISKFITQEYWSIKAEMQNSKDEAFFAMLSHYDNKKLEKFDIKNEEEAKNLVREIES
RQYAVSTVERKQVKRNPLPPFITSSLQQDAVNKLYFNVKNVMRVAQNLYEGINIGGETVG
LITYMRTDGFHIADEAINSIRGSIKSLYGDKYLPHSPRKYVKKVKNAQEAHEAIRPTDIN
RTPGSIKDYLTPEQFKLYDLIWKRTIASQMESAILDQVVVEISSIDQKVILRASGSSIFF
DGFYKVYQDNIEAKNEGLLPSMKEEEACKLISVDPKQHFTQPPPRYSEASIVKKMEEVGI
GRPSTYATIISVLQDREYVSLDNKRFIPSSRGKIVTIFLETFFQRCVEYDFTAQMEERLD
SISNGHADWKKELGYFWVPFFNHVNSVKQMTHDEIFSGIHDLVVNWFCSEEGKEEIGKKC
PNCSGGILKLNFGKAGVFLGCSNYPACNHTKEITDSNDNSEYPKSLGIDDVTGQEVMIKK
GPFGLYLEFNSESEKKKKISVPKDINVNDIDLNTATRLLSLPKIIGEHPETGKEVKIGLG
RFGYHILYDGRYFSLKKSSKEVLDTQLNEAIQIIESSPRKELKSLGFNEKGKEVFICNGR
YGFYIKCGKTNVALGKNADIESIDLKKALELIKNKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcattattaatagttgagtcgccagcaaaggcaaagacgataggtaaatatttgagt
aaagaattcaaagtggctgcatcttttggccacgtcagagatctgccagcgaagaatggt
tctgttgatcctgataatgactttgccatgaagtatgagattattgaaaaagcagaaaag
tatgtaaaagagttagtcaaggaagctagtaaaacatcagatatataccttgcaacagat
ccagacagagaaggagaagcaatagcttggaatgtgatagaggcactaaaggaaagaaaa
gcaatcaatgatgaaagcaacattcatagagtagtctttaacgaaataacaaaaagagca
gtgcaagaagctataaaaaatccacgtgaaattaatatggacttagtgcgtgcacagcaa
acacgcagagctttggattatctagttggatttagcttgtcaccgctgctgtggacaaaa
ttgtcgggaagcaaatctgcagggcgagtgcagtctgttgcattaaagcttatatgcgaa
cgagaggatgaaatcagtaagtttataacacaggagtattggagcataaaggcagaaatg
caaaatagcaaagatgaggctttttttgctatgctaagccactatgacaataaaaagcta
gaaaaatttgatattaagaatgaagaagaggcaaagaacttagtcagggagatcgagtca
aggcagtatgctgtaagcacagtagaacgcaagcaagttaagagaaacccgcttcctcca
tttatcacctcaagtcttcagcaagatgcagtgaataaactgtattttaatgtgaaaaat
gttatgcgagtagcgcaaaatttatatgaaggtatcaatattggtggtgaaaccgtagga
ttgataacttacatgcgtacagatgggtttcatattgcagatgaggctataaactcaatc
aggggatcaattaagtcattatatggtgataaatatttaccgcattctcctcgtaaatat
gtaaaaaaggtcaaaaatgctcaagaagcacatgaagcaatccggccaactgatattaat
agaacgccgggtagtattaaggattacttaacgccagagcaatttaaattgtacgattta
atctggaaaagaaccatcgcaagtcaaatggaatcggcgattcttgatcaagtggtagtt
gaaattagttctattgaccagaaagtgattctgcgagcaagtggatcaagtatattcttt
gatggtttttataaagtctatcaagataacatagaagccaaaaatgaaggcctgctacct
tccatgaaggaagaggaagcgtgcaagttgatttctgttgatccgaaacagcattttact
caaccgccacctcgttatagtgaagcgagtatagtaaaaaaaatggaagaagtcggtata
ggtcgcccatcaacttatgcaacaattatttcggtattacaagatcgtgaatatgtttca
ttggataacaaaagatttattccaagcagccgcggtaagatcgtgactatatttttggaa
actttttttcagcgttgtgtagagtatgactttacagcacaaatggaagaaaggcttgat
tcaatctcaaatggacatgcagattggaaaaaagaactaggctatttttgggtgccattt
tttaatcatgtaaattctgttaagcaaatgacacatgatgagatttttagtggtattcat
gatttggtagtcaattggttttgctcagaggaaggaaaggaagaaataggtaaaaaatgt
cctaattgctctggtggtatattgaaattaaattttggaaaagccggtgtgtttcttgga
tgttctaactatcctgcatgcaatcatacaaaagaaattacggacagtaatgacaattca
gaatatccaaaaagtttgggtatagatgatgtgacaggccaagaggtaatgatcaaaaaa
ggtccttttggactttatctggagtttaatagtgagtcagaaaagaaaaaaaagatttct
gtaccaaaagatataaatgttaatgatattgacctaaataccgccactcgattactttcc
ctgccgaaaataatcggagaacacccagaaactggaaaggaagtaaaaataggtcttgga
cgatttggataccatattctctatgatggtcgatacttttctcttaaaaaaagctctaag
gaggtattagacacacaattaaacgaagctatacaaattattgagagcagcccacgcaaa
gagctaaaatctcttggttttaatgaaaagggaaaagaagtttttatctgcaacggtagg
tacggattctatataaaatgcggtaaaacaaacgttgctttgggcaagaatgcagatatt
gaaagtatagatctgaagaaggctttagagttaattaagaataaaaagtag
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integrated database retrieval system
