Wolbachia endosymbiont of Ostrinia scapulalis: M1L26_000585
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Entry
M1L26_000585 CDS
T08570
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
wek
Wolbachia endosymbiont of Ostrinia scapulalis
Pathway
wek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
wek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1L26_000585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
wek03019
]
M1L26_000585
Messenger RNA biogenesis [BR:
wek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M1L26_000585
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
URG41514
LinkDB
All DBs
Position
595660..597294
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AA seq
544 aa
AA seq
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MNINKNEFLFLPLGGVGRIGMNVSLYHYQGKWIMIDLGIGFADETMPGVELLIADVDFIA
QRKKDLLGIIITHAHEDHCGAVPHLWEDLQCPIYTTKFTVNFLKEKLKEFRLEGVVPVKE
VDINGSINLGPFTVEFINVTHSIPEANSILISTEAGSALHTGDWKFDPKPVVGLISNIER
LKEIGDKGDLLAAICDSTNILSKHDPESESEIYDNIYNIIKRSKKLIAVSLFASNVARIE
TIAKAAQALNRKVVLLGRSLWRIVKVAQDSGYLTDSPEFLEAKEAVNFPREKLVLLCTGC
QGEPLAATSRLANKSHQAFKMQQGDTIIFSSKIIPGNETRAHNMLNAFIEMGVEVITEKT
ENVHASGHPVKAELREMYSLIKPKIAIPVHGEYIHTDAHVKFAKECGVKKAIMIAPGDIV
NLENGEKVSSIDVDYFGIDGTLLRHPECSVIKMRERMRDAGVIVVTAIVNKKNKLLAKPK
IFAPGVFEAQEDAAIMQKIIEKVESAFSPQPIKKIRNKIESSIFSILKEYLLKRPIVEVQ
IEQV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaacaaaaatgagtttttatttcttcctcttggaggagtaggaagaattggg
atgaacgttagcctatatcattatcaaggcaagtggattatgatcgaccttggtatcggt
tttgcagatgaaactatgccaggtgttgagctactcattgctgatgtagattttattgct
caaagaaaaaaagatttgcttggaataataattacacatgcacatgaagatcactgtggt
gcagtgcctcatctgtgggaagatttgcaatgtcccatatatacaacaaagtttacagtt
aattttctcaaggagaaactaaaggagtttcgattggaaggtgtggtacctgtgaaagag
gtagacataaatggcagcataaatttgggtccttttaccgttgagtttataaatgtaact
cactcaattcctgaggcaaattcaatattaattagcactgaagcaggtagtgcacttcat
actggggactggaaatttgatccaaaacctgttgttggattaatttctaatatagagcgt
ttaaaagaaattggcgataaaggtgatctacttgcagcaatttgtgattcaacaaacata
ctgagcaaacacgaccctgaatcagaaagtgaaatttatgataatatttacaatataata
aagcggtctaaaaaattgattgctgtatcgctatttgcctcaaatgtggcgcgaattgag
actatcgctaaagctgcacaagcactaaatagaaaagtggttttacttggcagatcttta
tggagaatagtgaaagttgctcaggatagtggttatttaactgattctcctgagtttcta
gaagcaaaggaggcagtaaattttccaagggaaaagctggtgctactttgcacaggttgt
caaggtgagccactggcagcaacctcaaggcttgctaataagagtcatcaagcatttaaa
atgcagcaaggtgataccataatcttttcatcaaaaatcattcctggcaatgaaactcgt
gcacataacatgctcaatgcctttattgagatgggagtggaagttattactgaaaaaaca
gagaatgttcatgcttccggacatccagtaaaagcagagctaagggaaatgtattctttg
ataaaacctaagatagctattccagttcatggtgagtatattcatacggatgcacatgta
aagttcgctaaagagtgcggtgtgaaaaaagcaataatgattgcaccaggtgatattgtt
aatttggagaatggagaaaaagttagttcaattgatgttgactactttggtattgatggt
acgttgctacgccatccagaatgcagcgttataaagatgcgtgagagaatgagagatgct
ggggttattgtagtaacagcaattgtgaataagaaaaacaaattgctcgctaagccaaaa
atatttgcacctggtgttttcgaagcgcaagaagatgcagccattatgcaaaagatcata
gagaaggttgagtcagcatttagtccacaaccgataaaaaaaataagaaataagattgaa
agttcaatatttagtatcttaaaggaatatttactaaaaagacctatagttgaagtccaa
atagaacaggtatag
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