Wolbachia endosymbiont of Ostrinia scapulalis: M1L26_000927
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Entry
M1L26_000927 CDS
T08570
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wek
Wolbachia endosymbiont of Ostrinia scapulalis
Pathway
wek03410
Base excision repair
wek03430
Mismatch repair
wek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M1L26_000927 (recJ)
03430 Mismatch repair
M1L26_000927 (recJ)
03440 Homologous recombination
M1L26_000927 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wek03400
]
M1L26_000927 (recJ)
DNA repair and recombination proteins [BR:
wek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M1L26_000927 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M1L26_000927 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M1L26_000927 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
URG40803
UniProt:
A0A9Q8TL22
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All DBs
Position
complement(973957..975696)
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AA seq
579 aa
AA seq
DB search
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLI
RSLLPDPFHLLDMDKAVSHIIKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSII
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEEARVFGLDIIVIDHHLGI
EKLPSAVAVVNPNRLDESSPYNNLAAVGVSFLLIVALNRSLREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGP
CINAGGRIGEASLGARLLSTDDEEKAHSIALKLIDLNNARKMLENEAILEATTQAENFAH
LGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNGIGKASCRSISGVDIGAAVLS
AKFTNLIIEGGGHSMAAGFSIEEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
LWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTE
LGSAIMQGNVKAILGKISMNYWNGNEFIQFMIEDVLTIS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgatattgaaaaacgcagcataacaaatgcactgtggaagttacaagaagca
gatcaaagggagatttttactcttatacagagatttgagttgccagaaatattagcaaga
atattagttgctcgtggtgttaacatagaaaatgcacatgacttcttacacccactaatc
agatcgctattaccagatccctttcacctccttgatatggataaagctgtttctcacata
ataaaagcaataaacaataatgagaatattgcaatatttggtgattacgatgttgatggt
gcaacgtcatcagcattgattaatagatacctaagagcgattgggacacactctataatc
tatattccagatcgtgttgatgagggctatggattgaacacagatgctttattacaactt
aaaaagaatggtattgatttatgtatttctgttgattgcggtacgcttgcatatcaacca
atagaagaggcaagggtttttggacttgatattatagttatcgatcatcaccttggtata
gaaaaattaccaagtgctgtagcagttgttaatcccaaccgccttgatgagagctctcct
tataataacttagcagcagttggagtgtcatttctgctaattgttgctcttaacagaagc
ctacgtgagcaaggattttttaccaacaaaaaagaaccagatttatttgatctactggat
ttggttgctcttggaactgtttgcgatgttatgcagattacaggcctaaatagggctttt
gttttacaaggattaaaagttatgtcagcaagaaaaaatgttggcttacgtgttttgttt
gacgctttgggaatccttgaaaaaccaagtgtttcacgattagggtttagtattgggcca
tgtataaatgccggaggaagaattggagaagcatcgctcggtgcaaggttgctttccact
gatgatgaagaaaaggcgcattcaatcgcgctaaaactaatagatttgaataatgcaaga
aaaatgctagaaaatgaggctattttggaagctacaacacaagcggaaaattttgcccac
ttaggtgtaaattttataatggtaagtggtaattggcaccagggaataattggtatcatt
gcatcaagactaaaagagcagtttcacttaccaacgatagtgatatctttaaacaatgga
ataggaaaagcaagctgtaggtcaatttctggagtagatattggtgctgcggttctttct
gcaaaatttaccaacctaatcattgaaggtggtggtcacagtatggcagcaggattttcg
attgaagaagataaaataagtgatctacatgatttttttactgaaagatttgcaaactct
acaaatgacaaaatcataaaagccgatggcatagtaacagctaaagcaataaacttatcc
ctttggaatcaattgcaacgcttagagccatttggtgttggcaatcctgaaccgagattc
atcattcaaggagcaaagataagaaagccggaagttataggagttgaccatataaaatgt
tttattgctgacgataatgttatggtcaaagctattgcgtttcgctgtgcaaatactgag
cttggctctgctattatgcagggtaatgttaaagccattttgggtaaaatctctatgaat
tactggaatggcaatgaatttatacaatttatgatagaagatgtcttaaccattagttaa
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