Wolbachia endosymbiont of Litomosoides sigmodontis: GOY07_02060
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Entry
GOY07_02060 CDS
T07654
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
wel
Wolbachia endosymbiont of Litomosoides sigmodontis
Pathway
wel03030
DNA replication
wel03430
Mismatch repair
wel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GOY07_02060 (dnaE)
03430 Mismatch repair
GOY07_02060 (dnaE)
03440 Homologous recombination
GOY07_02060 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wel03032
]
GOY07_02060 (dnaE)
03400 DNA repair and recombination proteins [BR:
wel03400
]
GOY07_02060 (dnaE)
Enzymes [BR:
wel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GOY07_02060 (dnaE)
DNA replication proteins [BR:
wel03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GOY07_02060 (dnaE)
DNA repair and recombination proteins [BR:
wel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GOY07_02060 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKX02981
UniProt:
A0A7Z3E008
LinkDB
All DBs
Position
498111..501452
Genome browser
AA seq
1113 aa
AA seq
DB search
MFIHLRVHSVYSLLESSVKIEELISLCLWNKMPAVAITDSGNLFGSLEFSEYAASKGIQL
ITGCDIIVRHSEQNLPILLLAKNEQGYTNLVTLVSDSFRKRQNNSDIPYVDFGELLNLST
GLITLAGGCDGILAQLLLKQDKETVEKLLSAFNGHLYIELQRHGSNKELELEETLINFAY
QHNIPLVATNDVFFLNRSDYEAYNILTCISEGSYALENNRNKLTTEHYFKSVEEMEKLFS
DIPEAIHNTLVIAKRCSYMPRSRQPILPKFPCRENKTENEELKEQATAGLRFRIANEIDI
DLKQYYDRLNYELSVITSMNYAGYFLIVSDFIRWSKANSVPVGPGRGSGAGSIVAWALQI
TDLDPIKFGLIFERFLNPDRISMPDFDIDFCQEKRDLVIGYVQKKYGYVAQIITFGKLQA
KAVLRDVGRVLQMPYTQVDKISKMIPFNPVNPITLSQAIEFDQNLQKERDSDEVIAKLLD
ISLKLEGIYRHVSTHAAGIVICDQKLENFVPVYYDPNSALPITQYSMKYVEKAGLIKFDF
LGLSTLTLIDHVHRLINRNGKKIDVSSISLNDCKTYEMLSNGDSIGVFQLESSGMREALI
KLKPDCIEDIIALISLYRPGPMDNIPTYIARKHGLEKPDYIHPLLESVLKETFGVIIYQE
QVMEIARILSGYSLAEADLLRRAMGKKIKAEMDKQRELFIQGATKNGVDYDRASYIFDLV
AKFAGYGFNKSHAAAYAVISYQTAYLKANYPLEFFTALMNLNIDDRDKLNLFYHAAKFSG
VSILLPDIRKSKAEFSIEGKHIRYGIAALRNVGFSIAEGIVNTRSSAYKDIWEFIQNSGY
IINKRALESLIKSGACDSVHKNRKQLYESMDTLIYFANKNRQDRESNQAVLFDNFDVLKP
KLKEVKDFNEEEKLEHELFSLGFYLTSHPLEKFRTFLEKLNIGFIGKNKTAKTAGVILNM
RMRTSARGRFVILTLSDPHNVSEIAFYNNEVIEEKRNLFSPGTFVIIDLKTSENTTRLVG
MDISEFTEKTASIMKSLILTTECADSQKAAMELNSVLKGGNGKTKIMLRLLCEKNTVNIL
LPGTYLITPQAVYEISNLSWIKGIEIDTNGLLI
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgtttatacacttgcgtgttcatagtgtttattctttacttgaaagttcggttaaaatt
gaggagctgataagtctttgtttgtggaacaaaatgccggcagttgcaattactgattcg
ggtaatttatttggttcacttgaattttcagaatacgcagcaagtaaaggaatacagcta
ataacaggatgtgatattatagttaggcattcagaacaaaatttacctatattattgctt
gcaaaaaatgagcaaggatacactaatctagttactttggtaagtgattctttcagaaag
cgtcaaaataacagcgatattccttatgttgattttggtgagctattaaatttaagcaca
ggtctgatcactttagctggtggatgtgatggaatattagctcagctgttattaaagcaa
gataaagaaacagttgaaaaactgctttcagcgttcaatggtcacttatatattgaactg
cagcgtcacgggtcaaataaagaattggagcttgaagaaaccttgataaactttgcttac
cagcataatataccacttgttgcaacaaacgatgtattttttctaaataggtctgactat
gaagcttataatatattaacgtgtatatcggaagggagttatgctctggaaaataacaga
aataagctaactactgagcattattttaagtctgtggaggaaatggaaaagctgtttagt
gatattcctgaagcaattcataatactttagtaatagctaagcggtgctcttacatgcca
agaagcaggcagcctattttgcctaaatttccttgtcgagaaaataaaactgagaatgaa
gaattaaaggagcaagcaactgcaggattaaggtttcgtattgcaaatgaaatagacata
gaccttaaacaatactatgaccggctgaattatgaactaagtgtaataacttcaatgaac
tatgctggctactttttgatagtttctgactttattcgctggagtaaggcaaatagcgtt
ccagttggtccaggaaggggttcaggtgctggatcaattgttgcttgggcattgcagatt
acagacttagacccaataaaatttggcctgatctttgaaagatttttaaatccagatcgt
atatcgatgcctgactttgatattgatttctgccaggaaaaaagggacttagttattggt
tatgttcaaaagaaatatggttatgttgctcaaataattacttttggtaagttacaagca
aaggccgtgttgcgtgatgttggaagggtattacaaatgccttacactcaagtggataaa
atatctaaaatgattccatttaatccagtaaatcctataactttatcacaagcaatagag
tttgatcaaaacttacagaaagaacgggatagtgatgaagtaattgcaaagcttcttgat
atttctcttaagcttgaaggaatatatcgccacgtttcaactcatgctgctggaattgtg
atatgtgatcaaaaattagaaaatttcgttcctgtgtactacgatccaaactcagctcta
ccaattacacaatacagcatgaagtatgttgagaaagctgggctgataaaatttgatttt
cttggacttagtacattaacgctaatagatcacgttcatcgtttaattaatcgcaatggg
aaaaagattgacgtttcctcaatttccttgaatgattgcaaaacttacgaaatgctctca
aacggtgattcaattggagtatttcagcttgaaagttctgggatgagggaagctttaatc
aaactaaagccagactgcattgaagatatcattgcattaatctctctttatcgtccagga
cctatggataatattccaacttacatcgcaagaaagcacggacttgaaaaaccagattat
attcatccattacttgaaagtgtattaaaagaaacatttggagtgataatctatcaagaa
caggtgatggagatagcacgcattctttctggatatagtcttgcagaagcggatttgcta
agacgtgctatgggtaagaaaattaaagcagagatggataaacaacgtgaactttttatt
caaggggcaacaaaaaatggcgttgattatgatagggcaagttatatttttgaccttgtt
gcaaaatttgctggttatgggtttaacaagtctcacgcagccgcatatgcagttatatct
tatcaaacggcttatcttaaagctaattatccgttagaattttttacggccttaatgaat
ctgaatatcgatgatagagataaattgaatttgttttatcatgctgcgaaatttagtggt
gtttctattcttttgcctgacataagaaaatctaaggctgaattctcaatagagggcaag
cacatacgctacggtattgctgctctgcgcaatgttggtttttctatagcagaagggata
gtgaatacacgttcaagcgcttataaggacatatgggagttcattcaaaattcaggttat
ataataaataaaagagcactggaaagcctaattaagtccggagcatgtgatagtgtgcat
aagaacagaaaacaactatacgaatcaatggacacactgatttactttgcgaataaaaat
agacaggatagagaatcaaatcaagctgttttgtttgataattttgatgttctaaagccg
aaacttaaggaagtaaaagattttaatgaagaagaaaaattagagcatgagttattttcg
ctagggttttatttaactagccatccacttgaaaagtttagaacttttcttgagaagcta
aatattggatttattggaaagaataagacagcaaagactgctggtgtaatattaaatatg
cgtatgagaacctcagcgcgtgggagatttgttatacttacgctttctgatcctcataat
gtttctgaaatagcgttctacaataatgaagtaatagaggagaaaaggaatttattttcg
cctggaacatttgtgataattgatcttaaaacttcggagaatacaacaagattagtggga
atggatatatcagaatttacagaaaagactgcctctataatgaaaagtttaattttaact
actgaatgtgctgattcacaaaaagctgctatggagttaaattcagtattaaaaggtggc
aatggcaaaactaaaataatgctcagacttctctgtgaaaagaatacagtgaatatcttg
ctgcctggtacatatctaattacccctcaagctgtttatgaaatatctaacttaagctgg
attaaaggcatagaaattgatacaaatggcttgcttatctga
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