Wolbachia endosymbiont of Litomosoides sigmodontis: GOY07_02790
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Entry
GOY07_02790 CDS
T07654
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
wel
Wolbachia endosymbiont of Litomosoides sigmodontis
Brite
KEGG Orthology (KO) [BR:
wel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
wel03032
]
GOY07_02790 (topA)
03400 DNA repair and recombination proteins [BR:
wel03400
]
GOY07_02790 (topA)
Enzymes [BR:
wel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GOY07_02790 (topA)
DNA replication proteins [BR:
wel03032
]
Prokaryotic type
DNA Topoisomerases
GOY07_02790 (topA)
DNA repair and recombination proteins [BR:
wel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GOY07_02790 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QKX03104
LinkDB
All DBs
Position
complement(682543..684993)
Genome browser
AA seq
816 aa
AA seq
DB search
MALLIVESPAKAKTVSKYLSKEFKVAASFGHVRDLPVKDGSVDPDNDFAIKYEIVEKAEK
HVKELVKEASQTSDIYLATDPDREGEAIAWNIIEVLKEKKAINDKSNIYRVVFNEITKRA
VQEAIENPRGMNMDLVRAQQARRALDYLVGFSLSPLLWTKLSGSKSAGRVQSVALKLICE
RENEISKFISQEYWSIRAEMQNRKRETFFVVLSHYDNKKLEKFGIRDKEETKALIRQVKS
RQYAVNTVERRQFRRNPLPPFITSSLQQDAVNKLYFNVKNVMRIAQNLYEGIDIGDETVG
LITYMRTDGFYIADEAINSIRGLIKSLYGDKYLPKSPRQYVKKVKNAQEAHEAIRPTDIN
RTPESIKDYLTPEQFKLYDLIWKRTTASQMESAILDQVVVKISSADQKVLFQASGSSIFF
DGFYKVYKDNMNSEDENMLPAMREGEECKLISVDLKQHFTQPPPRYNEASIVKKMEEIGI
GRPSTYAAVISVLQDREYVTLDNKRFIPSSRGKIVTIFLETFFQRCVEYDFTAQMEEKLD
LISNGRADWKKELGYFWVPFFNHVNSVRQMTHDEVFNGIHDLVIDWFCSEEGKKEVNKKC
LNCHDGVLRLNFGKAGVFLGCSNYPTCTHTKEITGSNDSYEYPKSLGIDDVTGQEVVIKK
GPFGLYLKLNSESEKKKTVSIPKDINVSDIDLNTAIRLLSLPKVIGKHPETGKEVKMGLG
RFGYYIFYDSKYFSLKKSSKEVLETQLDEAVQIIVNNARKELKSLGFNEEGKEVFICSGR
YGFYIKCGKINVALGKNVDVEGISLKRALELIRSKK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggcattgttgatagttgagtcgcctgcaaaagcaaagacggtaagtaaatatttaagt
aaagagtttaaagttgctgcgtcttttggacatgtaagagatcttccagtgaaggacggt
tctgttgatccagataatgattttgccataaaatatgaaattgttgaaaaagcagagaag
catgtaaaagagctagtaaaggaagccagtcaaacgtcagatatataccttgcaacagac
ccagatagggaaggggaagcaatagcttggaatataatagaggtactaaaggagaagaaa
gcaatcaatgataaaagcaacatttatagagtggtctttaatgaaataacaaaaagggcg
gtacaagaggcgatagaaaatccacgtgggatgaatatggacttagtacgtgcgcaacaa
gcacgtagagctttggattatttggttgggtttagcttatcaccactgctgtggacaaaa
ttgtctggaagcaaatctgcagggcgagtgcaatctgttgcattaaagcttatatgcgaa
cgagaaaatgaaattagtaaatttatatcacaagagtattggagcatcagggcagaaatg
caaaatagaaaaagagaaactttttttgttgtgctgagccactatgacaataaaaagcta
gaaaaatttggtattagagacaaagaagagacaaaagccttaattaggcaagttaaatct
aggcaatatgctgtaaacacagtagaacgcaggcaatttaggagaaatccgctacctcca
ttcattacttctagtcttcagcaagatgcagtgaataagctctattttaatgtaaaaaat
gttatgcgcatagcacaaaatttgtacgaaggtatcgatattggggacgagactgtaggg
ttaataacttacatgcgtacagatgggttttatattgcagatgaggctataaactcaatc
agagggttaattaagtcattgtatggtgataaatacttaccaaagtctcctcgtcagtat
gtaaaaaaggttaaaaatgctcaagaagcgcatgaagcaattcgtccgactgatataaat
agaacgccggagagcattaaggattacttaacgccagaacagtttaaattgtatgatttg
atttggaaaagaaccactgcaagtcagatggaatcggcgatccttgatcaagtggtagtt
aaaattagttctgctgatcagaaagtgctttttcaagcaagtggatcgagcatattcttt
gatggtttctataaggtttataaagataatatgaatagtgaggacgagaacatgctacct
gctatgagagaaggtgaagagtgtaagctgatttctgttgatctaaaacaacattttact
caacctccaccacgttataatgaagcaagtatagttaagaaaatggaagaaattggtata
gggcgtccatcaacttatgcggcagttatctcagtgttacaagatcgtgagtacgttacg
ttggataataaaagatttattccaagcagccgcggcaaaattgttaccatatttttagaa
actttttttcagcgttgtgtagagtatgacttcacagcgcaaatggaagaaaagctcgat
ttaatctcaaatggacgtgcggattggaagaaggaactgggttatttttgggtaccattt
tttaatcatgtaaactctgtcaggcaaatgacgcatgatgaagtttttaacggcattcat
gatttagtaattgattggttttgttcagaagaagggaaaaaagaagtaaataagaaatgt
cttaattgtcatgatggagtattaagattaaactttggaaaagctggagtgtttcttgga
tgttctaactatcctacatgtactcatacaaaagagattactggcagtaatgacagttat
gaatatccaaaaagcttgggtatagatgatgtaactggtcaggaagtagtgatcaaaaaa
ggtccttttgggctttacctgaagcttaatagtgagtcagaaaagaaaaaaacggtttcc
ataccaaaagatataaatgttagtgatattgatcttaataccgctattaggctgctctcc
ttaccgaaagtaattggaaaacacccagaaaccgggaaagaggtaaaaatgggcctcgga
cgatttggatactatattttttatgatagtaaatacttttctcttaagaaaagttccaaa
gaagtgctagaaacacagttagatgaagccgtgcaaattattgtaaacaatgcgcgcaaa
gagctcaaatctcttggttttaatgaagaagggaaagaagtttttatctgtagtggtaga
tatggattttatataaagtgcggtaaaataaatgttgctttaggtaaaaatgtggatgtt
gagggtatctctttgaaaagagctctggagttgattagaagtaagaaataa
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