Wolbachia endosymbiont of Listronotus oregonensis: NMD99_04660
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Entry
NMD99_04660 CDS
T09674
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
welo
Wolbachia endosymbiont of Listronotus oregonensis
Pathway
welo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
welo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NMD99_04660 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
welo03400
]
NMD99_04660 (uvrA)
DNA repair and recombination proteins [BR:
welo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMD99_04660 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NMD99_04660 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
BCA_ABC_TP_C
AAA_16
nSTAND1
AAA_29
nSTAND3
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WMT83959
LinkDB
All DBs
Position
925359..928154
Genome browser
AA seq
931 aa
AA seq
DB search
MDDFIRVKGAREHNLQGIDVNIPKNKLVVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLNIQDKPDVESITGLSPAISINQKSISKNPRSTVGTVTEIYDYLRLVYARIGVPY
SPATGLPITKQTVSQIVDTIIALPLETKIYILAPVVRGRKGEHLKEILEIKRQGYVRFKI
DGEVYNVDDLPKLDKNKKHDIFVVADRISILGDIGNRLPSSIESALKLGNGLMYVEVVNL
PDNHNSEYKNGQILTFSENFACPESGFTLEEIEPRLFSFNSPYGACGSCNGLGKKLAVDV
KLIVPDETLSISEGALKPVGPMFRQVHTSYGFLKSAILSLAENCKFSLDVPWKNIDQEVK
DMILFGSNKFQGLISILENQMDYDETLVERYCSVIHCKECTGHRLRKEALTVKIDSRHIG
EISGLSIDKSLKWFENLPDKLTEQQKQISSKILNEIIKRLAFLKNVGLNYLTLDRESSTL
SGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQCDNDRLIATLKDLRDMGNTVIVVEHD
EDTIMAADYAIDIGPGAGVNGGKVIAEGTPDQVQRNSGSITGQYLSGEKKILIPRRRKQA
TQFIKVINACENNLKNVNVKFPIGNLICVTGISGGGKSSLVIETLYKYSAHKIYHSSARY
GRCDRIEGLEYIDKVIEVDQSPIGRTPASNPATYVGMFTHIRNWFAGLSESKARGYNIGR
FSFNTRGGRCEACKGDGHLKIEMHFLPDVYVKCEQCKGRRYNRETLEVTYKGKSISDVLD
MTIDQACDFFENLPMVKEKLVSLQEVGLGYIKLGQSSTTLSGGEAQRIKLSKELSKRFTG
RTLYILDEPTTGLHFEDINNLLKILHRLVDLGNTVIVIEHNLHVIKTADYIIDIGPEGGI
KGGEVIATGTPEEVVKIPESVTGRYLKTYLL
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggacgattttataagagttaagggtgcaagggaacataatctgcaaggtatagatgtc
aatataccgaaaaataagctagttgttataactgggctaagtggttctggtaaatctagt
ctcgcatttgatacgatttatgcagaaggccaacgccgatacgttgaaagcctatcagct
tacgcgcgtcaatttctcaacattcaggataaaccagatgttgagtcgattacaggtctt
tcccctgcaatatctatcaaccagaaatcgatctcaaaaaatccaaggtcaacagttgga
actgttaccgaaatttacgattacttgcgcttagtatatgcacgaataggggttccttat
tcacctgcaactggattaccgataacaaagcaaactgtatctcaaattgtagatactata
attgcgttacctttagaaactaaaatatatatacttgcccctgttgtgcgtggtagaaag
ggagaacatctcaaagagatattggaaattaaaagacaaggttacgtaaggttcaaaata
gatggtgaagtgtacaatgtagatgacttgcctaaacttgataagaacaagaaacacgac
atttttgtggttgcagatagaatatcaatattgggcgatataggaaatcgactgccaagt
agtatagaatccgcactaaaacttggtaatggtctaatgtatgtagaagtagtaaaccta
cctgacaaccataattccgagtataaaaatggtcaaattctgactttttcagagaatttt
gcatgccccgagtctggtttcactcttgaggaaatagaaccaagattattttcttttaac
agcccttacggtgcatgtggttcgtgtaatgggcttggtaaaaagctggctgttgatgta
aagctgatagtgccagatgaaactctttcaatatctgagggtgctttaaagccagtagga
ccaatgttccgtcaagtgcacacaagttatggatttctaaaaagtgcaattctatcactg
gctgaaaattgtaaatttagccttgatgttccgtggaagaacatagatcaagaagtaaaa
gatatgatactctttggctctaataaatttcaaggtttgatcagtatcttggagaaccag
atggattatgatgaaacgcttgttgagcgatactgctctgttattcattgtaaggaatgt
actggccatagattgagaaaagaagcactcacagtgaaaattgatagcagacatataggt
gaaatatcagggctcagcatcgataaatcccttaagtggtttgaaaatttgccagacaag
ctcacagaacaacagaagcaaatctcaagtaaaatattaaatgaaataatcaagaggcta
gcatttctaaagaatgtagggttgaattacctaacgctcgatcgagaatctagcactctc
tctggcggtgagagtcagaggatcagacttgcttcgcaaattggctctggtttaacagga
gtgctgtatgtgcttgatgaaccctcgataggccttcatcaatgcgataatgatcggtta
attgctacactgaaagacttgagagacatgggtaacactgtaatcgttgttgagcatgat
gaagatacaataatggctgctgattatgcgattgatattggtcctggagctggcgtaaat
ggtggaaaagttattgcagaaggaacaccagaccaggtgcaaagaaattcagggagcata
acagggcaatatttgagtggagagaaaaaaattttaattccaaggagaagaaagcaagca
actcagttcataaaagtaataaatgcatgtgaaaataacttaaaaaatgtgaacgttaaa
tttcctatagggaatcttatttgtgttactggaatatcaggagggggaaaatcaagttta
gtcatagaaacgttatataaatattcagcacataagatatatcattcgtctgcacggtat
ggtcggtgtgatagaatagaaggccttgaatatatagataaagttatagaagttgatcag
tcgccaattggtagaactcctgcgtcaaatccagcaacatatgtcggtatgtttactcat
ataagaaattggtttgcaggtctttcggagtcaaaagcaaggggatataatataggccgg
ttttcatttaataccagagggggaaggtgtgaggcttgtaaaggtgatgggcacttaaag
atagagatgcattttctaccggacgtttatgtgaagtgtgagcagtgtaaagggcgaagg
tataatcgtgaaacattggaagttacttataaaggaaaatcaatctctgatgtgcttgat
atgacgatagatcaggcttgtgatttttttgaaaaccttccaatggtaaaagaaaagttg
gtttctttgcaggaagtggggcttggctatataaaactcggacagtcgtcaacaacgttg
tctgggggtgaagcacaacgaataaagctgtccaaagagctatcaaaaagatttaccgga
agaacattgtatattcttgatgagccaacaactggattacactttgaagatataaataac
ttactaaaaatactccatagattagtcgatctgggaaacactgttatagttatcgagcac
aatttgcacgttataaaaactgcagattatataatagacatcggaccagagggcggaata
aaaggcggagaagtgattgccactggaactccagaagaagtggtaaaaattccagaaagt
gttacaggcaggtatcttaaaacgtatttattataa
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