Wolbachia endosymbiont of Listronotus oregonensis: NMD99_04990
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Entry
NMD99_04990 CDS
T09674
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
welo
Wolbachia endosymbiont of Listronotus oregonensis
Pathway
welo03030
DNA replication
welo03430
Mismatch repair
welo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
welo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMD99_04990 (dnaX)
03430 Mismatch repair
NMD99_04990 (dnaX)
03440 Homologous recombination
NMD99_04990 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
welo03032
]
NMD99_04990 (dnaX)
03400 DNA repair and recombination proteins [BR:
welo03400
]
NMD99_04990 (dnaX)
Enzymes [BR:
welo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMD99_04990 (dnaX)
DNA replication proteins [BR:
welo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMD99_04990 (dnaX)
DNA repair and recombination proteins [BR:
welo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMD99_04990 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DUF3646
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
AAA_5
RCF1-5-like_lid
AAA_30
AAA_16
nSTAND3
AAA_19
ResIII
AAA_assoc_2
TIP49
AAA_18
Sigma54_activat
AAA_24
Zeta_toxin
CbiA
B12-binding_2
ABC_tran
DNA_pol3_gamma_R_C
Motif
Other DBs
NCBI-ProteinID:
WMT84015
LinkDB
All DBs
Position
990294..991778
Genome browser
AA seq
494 aa
AA seq
DB search
MNIALKHRPSSFKDLVGQDILVRVLENAFILNKIPQSILLSGSSGVGKTTTARIIALCLN
CSLGPIFEPCGSCENCLAIKNSSHPDVIEIDAASHTSIDDVKVILGDICYSPISSKFKVY
IIDEVHMLSSSAFNALLKTLEEPPSSVKFILATTEIKKIPITIIARCQRFDLHNIPVAKI
VERLNDVAQKESYSIEKGALELIARHSGNSMRNALFLMNQAVLYSKDGAISTKNVIDILG
LVDKDIIFDLLGAILEGDLQKALSVFDKAIKTANPLSIFEGLLQTIQLVCRFLITKEIDN
AVTEYEKNRIKDLSIKKSLIFFSRLWKVLLKGIQDIKTSTCNDVAAEMMLISLCYLSDLP
SPEQVVKKILSQNAQQGNTHSIGNEQQQNYDFDKVLQLLRRSNQIYLYKQLCNNLQLIDC
KPGYLKLKAVSKLDSNFCNDLKNYLNQVTQQEWVITVDTGYINREVSNLNYAPAVKDILD
TFKGAKVVNIENKE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatatagcattaaaacatcgtcctagtagctttaaagatctagtaggtcaagatata
ttagtgcgtgtattagaaaatgcttttattttaaacaaaatcccacagtctatactgctc
tctggtagtagtggagttggtaaaaccaccactgcaaggataatagctttatgtttgaat
tgttccctggggccaatttttgaaccttgcggatcatgtgaaaattgtctagcaataaaa
aattcaagccatccagatgtgattgaaattgatgcagcaagtcacactagcattgacgat
gttaaagtaatcctgggagatatttgctattcacctataagctctaaattcaaagtctac
attatagatgaagtacacatgttatccagcagtgcatttaacgcattacttaaaacccta
gaagagccaccctctagtgtaaaattcattttagcaactacagaaataaaaaagatacca
ataactattattgcacgttgtcaaagatttgatttacacaacattcctgtagctaaaata
gtagaacgtttaaatgatgttgcacaaaaagagagttattccattgaaaagggggcatta
gagttaattgcacgacattctggaaattcaatgcgtaacgccttgtttttgatgaatcaa
gcagtgctatatagcaaagatggtgcaatatccactaaaaatgtgatagacatacttggc
ctagtggataaagatattatattcgatctattaggagcaatattagaaggtgatttacag
aaagctctatcagtgtttgacaaggcgataaaaacagcaaacccacttagtatttttgaa
ggtctattgcaaacaattcagttagtatgccgttttttgattacaaaagaaattgataat
gcagttacagagtatgaaaagaacaggataaaagatttaagtataaagaagtctttaata
tttttttcgagattgtggaaggtgttgcttaaaggtattcaagatataaaaacttcaaca
tgcaacgatgttgctgctgaaatgatgttaattagcctctgttatctttctgatctgcct
tctccggaacaagtggtcaaaaaaattctttcgcagaatgcacagcagggaaatacgcat
agtataggaaatgaacagcaacaaaattatgattttgacaaagttttgcaactattaagg
cggagtaaccaaatttatctttacaaacaactgtgtaataatctacaattaatagattgt
aaacctggatatttaaaattaaaagctgtatctaagttggatagtaatttttgcaatgat
ttaaaaaattacttaaaccaggtgactcagcaggagtgggttattacagttgatacgggt
tatataaatagggaagtgagtaatttaaattatgcacctgcagttaaggatatacttgat
acatttaaaggtgcaaaagtagttaatatagaaaataaggagtaa
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