Wolbachia endosymbiont of Listronotus oregonensis: NMD99_06200
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Entry
NMD99_06200 CDS
T09674
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
welo
Wolbachia endosymbiont of Listronotus oregonensis
Brite
KEGG Orthology (KO) [BR:
welo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
welo03016
]
NMD99_06200
Enzymes [BR:
welo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NMD99_06200
Transfer RNA biogenesis [BR:
welo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NMD99_06200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF2251
HRDC
Motif
Other DBs
NCBI-ProteinID:
WMT84203
LinkDB
All DBs
Position
complement(1221244..1222422)
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AA seq
392 aa
AA seq
DB search
MLISTTSELEDTCEELIAKKPKFIAVDTEFIRNNLTYYPKLSLIQISYGEKSFIVDALVP
EIDLSFIKKIMLNQGITKVFHSCRQDIESLLTVFKCIPTPIFDTQVAAMFCHYYHDFIGY
SKVVEQYQGVVLDKIKAKNSDWLRRPLSEDQLDYAINDVVHLYDLYQILCNKLEENNRMC
WFQEEMESIVNINKYLHSPKDAWKRIKFNYEANPRLVLTVKAVSEWQETLAQRYNMNRNK
VINNAVIAGFIEKNVEHVDEILDDLKRNAKNIKDADLLEFVNIFNENEKNWMQQNNILPN
NYDKSVFDILSIILDSKCKESNISRKLVSSKDELTGSISGQIDKLFKGWRYDFFGRSVES
FLNTSSKFEISAVKSANNITKIQSNLVENNCC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctaattagtacaacatcagagctggaagatacgtgtgaagaattaatagcaaaaaag
ccgaaatttatagcagttgacacggagttcattagaaataatttaacctactacccaaaa
ttatcgttaattcaaatttcttacggagagaagagttttattgtagacgcattagtgcca
gaaattgatttatcattcattaagaaaataatgctaaatcaggggataaccaaagtgttt
catagctgccggcaggatatagaatccttactcactgtgtttaaatgtattcccactccc
atttttgatacccaagttgccgctatgttttgtcattattatcatgactttattggttac
tcaaaagtagtagagcaatatcaaggagtagtgctggataaaattaaagctaaaaattca
gattggttaaggcgtccgttgtccgaggatcagttagactatgcaataaacgacgtggta
cacctatatgacttataccaaatattgtgcaataaacttgaagaaaataataggatgtgt
tggtttcaagaagagatggaatcaatagttaatataaataagtatttacatagtccaaaa
gatgcatggaagagaattaaatttaattatgaagcaaatccaagattggtattaactgtt
aaagcagttagtgaatggcaagagaccttagcacagcgctataatatgaatcgtaataaa
gtaattaataatgctgtaatagctggttttattgaaaaaaatgtagagcatgttgatgag
attttagatgatctcaagaggaatgcaaaaaatataaaagatgcagatttactagagttt
gtgaatatttttaatgaaaatgaaaaaaattggatgcagcaaaacaacatcttaccgaat
aattatgacaaatctgtattcgatatactctcaattattttagatagtaaatgtaaagaa
agtaacatatcaaggaaattagtttcttcaaaagatgagttaaccgggtcaatatctggg
cagatagataaactattcaaggggtggagatacgatttttttggcaggtcagttgaatca
tttttgaacacaagctcaaaatttgagatttcagcagtgaaatccgcaaataatataacc
aaaattcagagtaatttagtggagaataactgttgctaa
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