Wolbachia endosymbiont of Chrysomya megacephala: CAI20_00510
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Entry
CAI20_00510 CDS
T07637
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
wem
Wolbachia endosymbiont of Chrysomya megacephala
Pathway
wem03410
Base excision repair
wem03430
Mismatch repair
wem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
wem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CAI20_00510
03430 Mismatch repair
CAI20_00510
03440 Homologous recombination
CAI20_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
wem03400
]
CAI20_00510
DNA repair and recombination proteins [BR:
wem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CAI20_00510
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CAI20_00510
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CAI20_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QEK89238
UniProt:
A0A5C0YLI5
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All DBs
Position
127648..129387
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AA seq
579 aa
AA seq
DB search
MLLDIEKRSITNALWKLQEADQREIFTLIQRFELPEILARILVARGVNIENAHDFLHPLI
RSLLPDPFHLLDMDKAVSHIIKAINNNENIAIFGDYDVDGATSSALINRYLRAIGTHSII
YIPDRVDEGYGLNTDALLQLKKNGIDLCISVDCGTLAYQPIEEAKVFGLDIIVVDHHLGT
EKLPSAAAVVNPNRLDESSPYTNLAAVGVSFLLIVALNRSLREQGFFTNKKEPDLFDLLD
LVALGTVCDVMQITGLNRAFVLQGLKVMSARKNVGLRVLFDALGILEKPSVSRLGFSIGP
CINAGGRIGEASLGARLLSTDDDDDAHSIALKLIDLNNARKMLENEAILEATTQAENFAH
LGVNFIMVSGNWHQGIIGIIASRLKEQFHLPTIVISLNNGIGKASCRSISGVDIGAAVLS
AKFTNLIIEGGGHSMAAGFSIEEDKISDLHDFFTERFANSTNDKIIKADGIVTAKAINLS
LWNQLQRLEPFGVGNPEPRFIIQGAKIRKPEVIGVDHIKCFIADDNVMVKAIAFRCANTE
LGSAIMQGNVKAILGKISMNYWNGNEFVQFLIEDVLTIS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgatattgaaaaacgcagcataacaaatgcactgtggaagttacaagaagca
gatcaaagggagatttttactcttatacagagatttgagttgccagaaatattagcaaga
atattagttgctcgtggtgttaacatagaaaatgcacatgacttcttacacccactaatc
agatcgctattaccagatccctttcacctccttgatatggataaagctgtttctcacata
ataaaagcaataaacaataatgagaatattgcaatatttggtgattacgatgttgatggt
gcaacgtcatcagcattgattaataggtacctaagagcgattggaacacactctataatc
tatattccagatcgtgttgatgagggctatggattgaacacagatgctttattacaactt
aaaaagaatggtattgatttatgtatttctgttgattgcggtacgcttgcatatcaaccg
atagaagaggcaaaggtctttggacttgatattatagttgtcgatcatcaccttggtaca
gaaaaattaccaagtgctgcagcagttgttaatcccaaccgccttgatgagagctctcct
tatactaatcttgcagcagttggagtgtcatttctgctaattgttgctcttaatagaagc
ctacgtgagcaaggattttttaccaacaaaaaagaaccagatttatttgatctactggat
ttggttgctcttggaactgtttgcgatgttatgcagattacaggcctaaatagggctttt
gttttacaaggattaaaagttatgtcagcaagaaaaaatgttggcttacgtgttttgttt
gacgctttgggaatccttgaaaaaccaagtgtttcgcgattagggtttagtattgggcca
tgtataaatgccggaggaagaattggagaagcatcgctcggtgcaaggttgctttccacc
gatgatgatgatgatgcacattcaatcgcgctaaaactaatagatttgaataatgcaaga
aaaatgctagaaaatgaggctattttggaagccacaacacaagcggaaaattttgcccac
ttaggtgtaaattttataatggtaagtggtaattggcaccagggaataattggtatcatt
gcatcaagactaaaagagcagtttcacttaccaacgatagtgatatctttaaacaatgga
ataggaaaagcaagctgtaggtcaatttctggagtagatattggtgctgcggttctttct
gcaaaatttaccaacctaatcattgaaggtggtggtcacagtatggcagcaggattttcg
attgaagaagataaaataagtgatctacatgatttctttactgaaagatttgcaaactct
acaaatgacaaaatcataaaggctgatggtatagtaacagctaaagcaataaacttatcc
ttgtggaatcaattgcaacgcttagagccatttggtgttggcaatcctgaaccgagattc
atcattcaaggagcaaagataagaaagccggaagttataggagttgaccatataaaatgt
tttattgctgacgataatgttatggtcaaagctattgcgtttcgctgtgcaaatactgag
cttggctctgctattatgcagggtaatgttaaagccattttgggtaaaatctctatgaat
tactggaatggcaatgaatttgtgcagtttttaatagaggatgtattgaccattagttga
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