Wolbachia endosymbiont of Chrysomya megacephala: CAI20_02775
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Entry
CAI20_02775 CDS
T07637
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
wem
Wolbachia endosymbiont of Chrysomya megacephala
Brite
KEGG Orthology (KO) [BR:
wem00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CAI20_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
wem03021
]
CAI20_02775
Transcription machinery [BR:
wem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CAI20_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_1
Sigma70_ner
Sigma70_r1_2
Sod_Ni
Vps54
Motif
Other DBs
NCBI-ProteinID:
QEK89631
LinkDB
All DBs
Position
592356..594254
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AA seq
632 aa
AA seq
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MSTINGTEDRKKIIKDLVTKSIRKGGFITFDDINDKLSDENFSTDFIDDTIALLQDSGIN
ILESSEDEEEAPSNNDGNKLDDDETSLNTTTTLVQNDDPVRIYLQDMSSVKLLSRADEIK
IAKKIESEKHNMLRAIIETSVAFKIIKTWRDDLSGGTFLLREIINLDAIYNSDFNMVDKE
ESEAEDVRDCVNDEEKGNDEKGNESEDISSANLNISVLEMESDLLPKVITALDEIIALTN
EALVLKKNSKDFSNELENLYNQIWSVALQIQFSDAAITRITQKLYEINRLITFEEANLIT
EARKYDIDRESFYNVYDDVLLEHEFSEISFLKINENQSLFTGELKNKFLRFINDSYEYIA
SALSNIKSYVQGDRVQEFKKVIKRIQKHEQEVSQAKQEMIKANLRLVVSIAKKYSKRGLD
LLDLIQEGNIGLMKAVDKFDYKRGYKFSTYGTWWVKQSITRAIPEQSKVVRIPVHMVEII
SKINKALRKMTHEMGREPTLEELSIELAMPLERIRKVMKIARDPVSLEAPTGKDDSSTFG
DCIEDKRVSKPEDAAILADLRGITTNVLATLTPKEERILRMRFGLGKDGKEHTLEEVGKI
FNVTRERIRQIEAKALRKLKHPSRAKKLRGFF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactattaatggtacggaagataggaaaaagatcatcaaagatcttgtaaccaaa
agtataagaaagggcggttttatcacttttgatgatataaatgataagttgtcagatgaa
aatttttcaactgattttatagatgatactatagctttattgcaagactctggaattaac
atactcgaaagtagtgaagatgaggaagaagctccttctaataatgatggtaataagctt
gatgatgatgagacatcgttgaatactactacaactttagtgcaaaacgatgatccagta
aggatttatttacaggatatgagctctgtaaagcttttgtcacgagcagatgaaattaag
atagcaaaaaaaattgaatctgaaaagcataacatgttacgtgcaataattgaaacatca
gtggcattcaaaataatcaaaacatggcgtgatgatttaagtggtggaacttttttactg
agagaaattataaatctggatgcaatttataactctgatttcaatatggtagacaaagaa
gaaagtgaagctgaagatgttagagattgtgttaatgatgaggaaaaaggtaatgatgaa
aagggaaatgagagtgaagacataagttcagctaacttaaatatttctgttcttgaaatg
gaaagtgatttattgccaaaggttatcacggcattggatgagatcattgctttaacaaat
gaagcattggtattgaaaaaaaattctaaagatttctctaatgagctagaaaatttatat
aatcaaatatggtctgtagcattacaaattcagtttagtgatgctgctattaccagaatt
acacaaaaactttacgaaataaatagactaatcacgtttgaagaagctaatcttattact
gaagctagaaagtacgatattgatagagaaagtttttataatgtttatgatgatgtgctt
ttagagcacgagtttagtgaaataagttttctcaagattaatgaaaatcaatctcttttt
acaggtgaattaaaaaataaattcttaaggtttataaacgatagctatgagtatatagct
agtgccttaagcaatattaagagttatgtacaaggagatagagttcaggagtttaagaag
gtaatcaagagaatacagaaacatgaacaagaagtctctcaagcaaagcaagaaatgatt
aaggctaatttaaggctggtggtttcgattgctaaaaagtattcaaaaagaggccttgat
ctgcttgatttgatacaagaaggtaatattggtcttatgaaggctgtggataagtttgat
tacaaacgtgggtataaattttcgacttatggtacttggtgggtaaaacaatcaatcact
agggcaatacctgaacagtctaaagtagttagaataccagtacatatggtggaaattatc
agtaaaatcaacaaagcattaagaaagatgactcatgaaatgggtagagagcctacatta
gaggaattgagtatagaattggcgatgccgctagaaagaatacgcaaagttatgaagata
gcaagagatccggtaagtcttgaagctccaacaggaaaggatgatagtagtaccttcggt
gattgtatagaagataagcgagtttctaaaccagaggatgctgcaatacttgccgacttg
cgtggtattacgaccaatgttcttgcaactttaacaccaaaagaagaaagaattctaagg
atgcgctttggccttggtaaagatggaaaggagcataccttagaagaagtaggaaaaatt
tttaatgttacacgtgaaagaattaggcaaatagaggcaaaagcactacgtaagttgaaa
catccaagccgtgctaaaaaacttagaggtttcttttaa
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